Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 KRT8P24-201ENST00000560290 1559 ntBASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC10.48□□□□□ -0.73
UBE2D4Q9Y2X8 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 CICP17-201ENST00000418553 2377 ntBASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 TMEM5-205ENST00000537373 1966 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 PKIG-203ENST00000372887 769 ntTSL 3 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 RN7SL618P-201ENST00000477850 296 ntBASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 AP000344.2-201ENST00000512987 629 ntBASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 AC004835.2-201ENST00000603762 682 ntBASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 AC004461.2-201ENST00000629517 803 ntBASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 ZNF790-207ENST00000614179 2361 ntAPPRIS P1 TSL 3 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 CDIP1-206ENST00000563507 1463 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 ICE1-201ENST00000296564 7927 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 ADK-205ENST00000539909 1866 ntTSL 2 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 CTBP1-AS2-206ENST00000581398 5652 ntBASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC10.47□□□□□ -0.73
UBE2D4Q9Y2X8 RASGEF1A-202ENST00000374459 3264 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
UBE2D4Q9Y2X8 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D4Q9Y2X8 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC10.46□□□□□ -0.73
UBE2D4Q9Y2X8 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
UBE2D4Q9Y2X8 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC10.46□□□□□ -0.73
UBE2D4Q9Y2X8 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D4Q9Y2X8 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC10.46□□□□□ -0.73
UBE2D4Q9Y2X8 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC10.46□□□□□ -0.73
UBE2D4Q9Y2X8 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC10.46□□□□□ -0.73
UBE2D4Q9Y2X8 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D4Q9Y2X8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D4Q9Y2X8 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC10.46□□□□□ -0.73
UBE2D4Q9Y2X8 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
UBE2D4Q9Y2X8 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC10.46□□□□□ -0.73
UBE2D4Q9Y2X8 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC10.46□□□□□ -0.73
UBE2D4Q9Y2X8 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.46□□□□□ -0.73
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms