Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 PRSS29P-201ENST00000440800 595 ntBASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 OR7E14P-202ENST00000530490 1290 ntBASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 AC061975.2-201ENST00000581722 295 ntBASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 PDE9A-202ENST00000328862 1956 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 C6orf62-202ENST00000378119 4134 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 KRT8P37-201ENST00000451609 1420 ntBASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 SNED1-201ENST00000310397 8174 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 SETD3-204ENST00000436070 2592 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
CROCCP3Q8IVE0 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 CLDN6-201ENST00000328796 1369 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 SMPDL3B-206ENST00000549094 1611 ntTSL 5 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 RPS8P6-201ENST00000426177 609 ntBASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 FOSL1P1-201ENST00000511041 816 ntBASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 TPM1-218ENST00000559281 851 ntTSL 5 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 RPL28-209ENST00000560055 670 ntTSL 3 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 AL356488.2-201ENST00000602755 427 ntBASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 AC004790.2-201ENST00000623588 572 ntBASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 Z98257.2-202ENST00000641138 1548 ntBASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC13.62□□□□□ -0.23
CROCCP3Q8IVE0 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms