Protein–RNA interactions for Protein: P48764

SLC9A3, Sodium/hydrogen exchanger 3, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3P48764 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC9A3P48764 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.84□□□□□ -0.19
SLC9A3P48764 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC9A3P48764 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC13.84□□□□□ -0.19
SLC9A3P48764 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
SLC9A3P48764 MEIS3P1-201ENST00000495167 958 ntBASIC13.84□□□□□ -0.19
SLC9A3P48764 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC9A3P48764 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC9A3P48764 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC9A3P48764 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC13.84□□□□□ -0.19
SLC9A3P48764 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SLC9A3P48764 AC093028.1-201ENST00000622998 982 ntBASIC13.84□□□□□ -0.19
SLC9A3P48764 AL590560.3-201ENST00000623350 461 ntBASIC13.84□□□□□ -0.19
SLC9A3P48764 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC13.84□□□□□ -0.19
SLC9A3P48764 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.84□□□□□ -0.19
SLC9A3P48764 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SLC9A3P48764 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC9A3P48764 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SLC9A3P48764 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SLC9A3P48764 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.84□□□□□ -0.19
SLC9A3P48764 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SLC9A3P48764 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
SLC9A3P48764 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC9A3P48764 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC13.84□□□□□ -0.19
SLC9A3P48764 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
SLC9A3P48764 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
SLC9A3P48764 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
SLC9A3P48764 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SLC9A3P48764 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SLC9A3P48764 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SLC9A3P48764 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SLC9A3P48764 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SLC9A3P48764 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
SLC9A3P48764 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
SLC9A3P48764 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.83□□□□□ -0.19
SLC9A3P48764 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC13.83□□□□□ -0.19
SLC9A3P48764 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 IL17RA-204ENST00000612619 8506 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
SLC9A3P48764 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
SLC9A3P48764 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC13.83□□□□□ -0.2
SLC9A3P48764 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC9A3P48764 TREML5P-201ENST00000421694 576 ntBASIC13.83□□□□□ -0.2
SLC9A3P48764 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC13.83□□□□□ -0.2
SLC9A3P48764 AC241585.1-201ENST00000433527 519 ntBASIC13.83□□□□□ -0.2
SLC9A3P48764 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC13.83□□□□□ -0.2
SLC9A3P48764 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.83□□□□□ -0.2
SLC9A3P48764 RAB35-202ENST00000534951 939 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC9A3P48764 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
SLC9A3P48764 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.83□□□□□ -0.2
SLC9A3P48764 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC13.83□□□□□ -0.2
SLC9A3P48764 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC13.83□□□□□ -0.2
SLC9A3P48764 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC9A3P48764 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.83□□□□□ -0.2
SLC9A3P48764 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 AL158212.4-201ENST00000624062 1286 ntBASIC13.83□□□□□ -0.2
SLC9A3P48764 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.2
SLC9A3P48764 SYN2-205ENST00000620175 3871 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.2
SLC9A3P48764 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC9A3P48764 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 AL360270.3-201ENST00000609118 1348 ntBASIC13.83□□□□□ -0.2
SLC9A3P48764 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
SLC9A3P48764 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC9A3P48764 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.83□□□□□ -0.2
SLC9A3P48764 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms