Protein–RNA interactions for Protein: Q9NWF4

SLC52A1, Solute carrier family 52, riboflavin transporter, member 1, humanhuman

Predictions only

Length 448 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC52A1Q9NWF4 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 TXNDC17-208ENST00000574838 746 ntTSL 3 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 AC140113.1-201ENST00000603467 169 ntBASIC21■□□□□ 0.95
SLC52A1Q9NWF4 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
SLC52A1Q9NWF4 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 OR6D1P-203ENST00000641209 4860 ntBASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 AREG-202ENST00000502307 956 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 HERC2P11-201ENST00000562845 725 ntBASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 AC100756.2-201ENST00000569537 736 ntBASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 AL591471.1-201ENST00000621855 229 ntBASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 AC138466.4-201ENST00000623965 852 ntBASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 PCDHA1-201ENST00000378133 2726 ntBASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC52A1Q9NWF4 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 LINC02021-201ENST00000504808 1608 ntTSL 3 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 ERP29P1-201ENST00000442902 706 ntBASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 RPL35P9-201ENST00000446059 350 ntBASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 PPOX-204ENST00000462866 473 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 AC026410.1-201ENST00000507366 1101 ntBASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 CYB561D1-207ENST00000527072 892 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 AC136624.2-201ENST00000574883 542 ntTSL 3 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 RN7SL665P-201ENST00000578793 300 ntBASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 AC009145.4-201ENST00000625119 1294 ntBASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 HLA-DQB2-231ENST00000435145 2026 ntBASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 ERCC1-208ENST00000589165 1453 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 ASB15-207ENST00000540573 1651 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC52A1Q9NWF4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 FMR1-215ENST00000616382 1648 ntTSL 5 BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 USP4-203ENST00000415188 1454 ntTSL 3 BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 GCSHP3-201ENST00000431120 391 ntBASIC20.97■□□□□ 0.95
SLC52A1Q9NWF4 CSNK1G2P1-201ENST00000442675 955 ntBASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms