Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 DMPK-219ENST00000600757 3357 ntTSL 2 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 AL138799.1-201ENST00000448213 1675 ntBASIC13.53□□□□□ -0.24
PTP4A1Q93096 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 AL365209.1-201ENST00000624418 6473 ntBASIC13.53□□□□□ -0.24
PTP4A1Q93096 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
PTP4A1Q93096 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
PTP4A1Q93096 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
PTP4A1Q93096 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.52□□□□□ -0.24
PTP4A1Q93096 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
PTP4A1Q93096 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
PTP4A1Q93096 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.52□□□□□ -0.24
PTP4A1Q93096 ATP13A2-202ENST00000341676 3681 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
PTP4A1Q93096 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
PTP4A1Q93096 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
PTP4A1Q93096 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
PTP4A1Q93096 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.52□□□□□ -0.24
PTP4A1Q93096 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.24
PTP4A1Q93096 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.24
PTP4A1Q93096 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
PTP4A1Q93096 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PTP4A1Q93096 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PTP4A1Q93096 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PTP4A1Q93096 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PTP4A1Q93096 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PTP4A1Q93096 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
PTP4A1Q93096 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 KRT8P14-201ENST00000414254 1442 ntBASIC13.52□□□□□ -0.25
PTP4A1Q93096 ZNF664-204ENST00000538932 4321 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PTP4A1Q93096 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 CICP17-201ENST00000418553 2377 ntBASIC13.52□□□□□ -0.25
PTP4A1Q93096 AC027612.1-201ENST00000445234 2395 ntBASIC13.52□□□□□ -0.25
PTP4A1Q93096 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
PTP4A1Q93096 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PTP4A1Q93096 AL139385.1-201ENST00000611744 3272 ntBASIC13.52□□□□□ -0.25
PTP4A1Q93096 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
PTP4A1Q93096 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.52□□□□□ -0.25
PTP4A1Q93096 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
PTP4A1Q93096 VIPR1-202ENST00000433647 3161 ntTSL 2 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 APP-205ENST00000358918 2366 ntTSL 5 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 PPP5D1-201ENST00000414155 1882 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
PTP4A1Q93096 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
PTP4A1Q93096 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms