Protein–RNA interactions for Protein: Q71U36

TUBA1A, Tubulin alpha-1A chain, humanhuman

Predictions only

Length 451 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1AQ71U36 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 AC099521.3-201ENST00000624251 2938 ntBASIC13.97□□□□□ -0.17
TUBA1AQ71U36 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TUBA1AQ71U36 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 ZCCHC18-206ENST00000611638 2941 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 AC004890.2-204ENST00000481968 304 ntBASIC13.96□□□□□ -0.17
TUBA1AQ71U36 FXR1-221ENST00000491674 365 ntTSL 2 BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 LY6E-204ENST00000519546 971 ntTSL 2 BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 SPCS2P1-201ENST00000561636 679 ntBASIC13.96□□□□□ -0.17
TUBA1AQ71U36 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 AL844908.2-201ENST00000609461 460 ntBASIC13.96□□□□□ -0.17
TUBA1AQ71U36 AL033527.5-202ENST00000641632 1098 ntBASIC13.96□□□□□ -0.17
TUBA1AQ71U36 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 LIG1-203ENST00000536218 3179 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TUBA1AQ71U36 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TUBA1AQ71U36 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC13.96□□□□□ -0.18
TUBA1AQ71U36 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TUBA1AQ71U36 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
TUBA1AQ71U36 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.18
TUBA1AQ71U36 CTCFL-205ENST00000423479 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
TUBA1AQ71U36 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 AP001267.2-201ENST00000532619 2086 ntBASIC13.95□□□□□ -0.18
TUBA1AQ71U36 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 RPL5P21-201ENST00000404620 815 ntBASIC13.95□□□□□ -0.18
TUBA1AQ71U36 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 SERBP1P3-201ENST00000459980 809 ntBASIC13.95□□□□□ -0.18
TUBA1AQ71U36 RNA5SP421-201ENST00000516864 134 ntBASIC13.95□□□□□ -0.18
TUBA1AQ71U36 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 STOM-203ENST00000538954 1257 ntTSL 5 BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 AC044860.1-202ENST00000559481 777 ntBASIC13.95□□□□□ -0.18
TUBA1AQ71U36 AC010336.2-201ENST00000564226 506 ntBASIC13.95□□□□□ -0.18
TUBA1AQ71U36 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 TOE1-201ENST00000372090 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 PPT1-213ENST00000641319 2388 ntBASIC13.95□□□□□ -0.18
TUBA1AQ71U36 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 MFSD11-217ENST00000590514 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 Z82170.1-201ENST00000625081 3192 ntBASIC13.95□□□□□ -0.18
TUBA1AQ71U36 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TUBA1AQ71U36 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms