Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 ALG9-201ENST00000398006 2345 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 ELP6-209ENST00000446787 894 ntTSL 3 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 CROCCP4-201ENST00000457096 498 ntBASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 SNX29P1-201ENST00000548357 1007 ntBASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 AC093726.1-201ENST00000608064 963 ntBASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
DDX49Q9Y6V7 ZNF831-201ENST00000371030 9401 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
DDX49Q9Y6V7 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
DDX49Q9Y6V7 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.5
DDX49Q9Y6V7 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 NUP98-201ENST00000324932 6973 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 HSPA7-201ENST00000445535 1927 ntBASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 ARHGAP23P1-201ENST00000562773 1937 ntBASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 LRRC17-202ENST00000339431 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 PAAF1-207ENST00000536003 1639 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 AC099568.2-201ENST00000609194 695 ntBASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 AL391069.4-201ENST00000609583 481 ntBASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 MTHFR-210ENST00000641407 2387 ntBASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 PREP-201ENST00000369110 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC18.14■□□□□ 0.49
DDX49Q9Y6V7 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 ANP32A-203ENST00000465139 2440 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 Z97205.2-201ENST00000564697 1639 ntBASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
DDX49Q9Y6V7 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms