Protein–RNA interactions for Protein: Q9HAU5

UPF2, Regulator of nonsense transcripts 2, humanhuman

Known RBP Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2Q9HAU5 MVK-214ENST00000629016 1591 ntTSL 5 BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 CETN4P-206ENST00000642099 2168 ntBASIC18.51■□□□□ 0.55
UPF2Q9HAU5 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 AF228730.6-201ENST00000641497 218 ntBASIC18.51■□□□□ 0.55
UPF2Q9HAU5 AC084121.3-201ENST00000641716 218 ntBASIC18.51■□□□□ 0.55
UPF2Q9HAU5 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 MSRB3-202ENST00000355192 4289 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 AL354702.1-201ENST00000442006 1960 ntBASIC18.51■□□□□ 0.55
UPF2Q9HAU5 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 RSPO3-201ENST00000356698 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 PLCXD2-201ENST00000393934 2063 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 SGTB-201ENST00000381007 5469 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
UPF2Q9HAU5 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 GMCL1-201ENST00000282570 4191 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 TOMM22P5-201ENST00000416399 439 ntBASIC18.5■□□□□ 0.55
UPF2Q9HAU5 FAM58DP-201ENST00000428076 619 ntBASIC18.5■□□□□ 0.55
UPF2Q9HAU5 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 AC004066.1-201ENST00000502488 802 ntBASIC18.5■□□□□ 0.55
UPF2Q9HAU5 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 INO80C-210ENST00000590757 595 ntTSL 2 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 MTDHP5-201ENST00000598980 586 ntBASIC18.5■□□□□ 0.55
UPF2Q9HAU5 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 ZFP64-201ENST00000216923 3264 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
UPF2Q9HAU5 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 ENDOV-206ENST00000518901 2549 ntTSL 2 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
UPF2Q9HAU5 AL627223.1-201ENST00000416693 442 ntBASIC18.49■□□□□ 0.55
UPF2Q9HAU5 CEND1P1-201ENST00000451006 455 ntBASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms