Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 AL022323.5-201ENST00000624101 2059 ntBASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 GOLGA2P5-201ENST00000266746 2395 ntBASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 FOXO1B-201ENST00000504678 1527 ntBASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 CCT6B-201ENST00000314144 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LYSMD2Q8IV50 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 ZNF202-207ENST00000530393 3564 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 ZNF331-217ENST00000512387 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 PTPN23-201ENST00000265562 5244 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 FAM49B-201ENST00000401979 2024 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 RXRG-204ENST00000619224 2252 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 NEK4-202ENST00000383721 2576 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 CRYGEP-201ENST00000412192 528 ntBASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 BMF-207ENST00000559701 630 ntTSL 3 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 PRELID1P1-202ENST00000567272 903 ntBASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 AC073389.1-201ENST00000595595 795 ntBASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 AC010507.1-201ENST00000633895 436 ntBASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 DPP10-201ENST00000310323 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 KRT8P37-201ENST00000451609 1420 ntBASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 GGA3-214ENST00000582717 2255 ntTSL 2 BASIC13.22□□□□□ -0.29
LYSMD2Q8IV50 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 AGAP10P-201ENST00000454844 2418 ntBASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 LRRC32-201ENST00000260061 4207 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
LYSMD2Q8IV50 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms