Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 OR2I1P-209ENST00000641730 5365 ntBASIC14.54□□□□□ -0.08
CAPN3P20807 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CAPN3P20807 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CAPN3P20807 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CAPN3P20807 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 MBLAC2-202ENST00000514906 1936 ntBASIC14.53□□□□□ -0.08
CAPN3P20807 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CAPN3P20807 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC14.53□□□□□ -0.08
CAPN3P20807 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CAPN3P20807 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CAPN3P20807 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.53□□□□□ -0.08
CAPN3P20807 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC14.53□□□□□ -0.08
CAPN3P20807 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.53□□□□□ -0.08
CAPN3P20807 U91328.1-201ENST00000437528 223 ntBASIC14.53□□□□□ -0.08
CAPN3P20807 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC14.53□□□□□ -0.08
CAPN3P20807 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.53□□□□□ -0.08
CAPN3P20807 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.53□□□□□ -0.08
CAPN3P20807 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.53□□□□□ -0.08
CAPN3P20807 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 TP53TG3HP-202ENST00000569755 579 ntBASIC14.53□□□□□ -0.08
CAPN3P20807 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
CAPN3P20807 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.53□□□□□ -0.08
CAPN3P20807 AC074044.1-201ENST00000609673 707 ntBASIC14.53□□□□□ -0.08
CAPN3P20807 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC14.53□□□□□ -0.08
CAPN3P20807 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC14.53□□□□□ -0.08
CAPN3P20807 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.53□□□□□ -0.08
CAPN3P20807 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC14.53□□□□□ -0.08
CAPN3P20807 PTPRO-202ENST00000348962 5061 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 PHKG1-210ENST00000537360 2139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CAPN3P20807 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN3P20807 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN3P20807 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN3P20807 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.52□□□□□ -0.08
CAPN3P20807 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
CAPN3P20807 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN3P20807 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
CAPN3P20807 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN3P20807 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN3P20807 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN3P20807 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN3P20807 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN3P20807 AC100757.3-201ENST00000622361 1406 ntBASIC14.52□□□□□ -0.08
CAPN3P20807 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN3P20807 AC018665.1-201ENST00000622927 1362 ntBASIC14.52□□□□□ -0.08
CAPN3P20807 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.52□□□□□ -0.08
CAPN3P20807 MST1P2-201ENST00000457982 2291 ntBASIC14.52□□□□□ -0.08
CAPN3P20807 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN3P20807 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN3P20807 GAS2L2-202ENST00000604641 3014 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CAPN3P20807 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN3P20807 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
CAPN3P20807 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPN3P20807 MRPS18AP1-201ENST00000414458 589 ntBASIC14.52□□□□□ -0.09
CAPN3P20807 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN3P20807 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.52□□□□□ -0.09
CAPN3P20807 AC022447.6-201ENST00000515522 438 ntBASIC14.52□□□□□ -0.09
CAPN3P20807 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.52□□□□□ -0.09
CAPN3P20807 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPN3P20807 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN3P20807 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.52□□□□□ -0.09
CAPN3P20807 AC000095.1-201ENST00000603208 874 ntBASIC14.52□□□□□ -0.09
CAPN3P20807 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.52□□□□□ -0.09
CAPN3P20807 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN3P20807 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN3P20807 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN3P20807 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN3P20807 AC079781.5-202ENST00000641784 3743 ntBASIC14.52□□□□□ -0.09
CAPN3P20807 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN3P20807 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN3P20807 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN3P20807 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN3P20807 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.52□□□□□ -0.09
CAPN3P20807 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
CAPN3P20807 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN3P20807 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN3P20807 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN3P20807 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
CAPN3P20807 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.51□□□□□ -0.09
CAPN3P20807 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
CAPN3P20807 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms