Protein–RNA interactions for Protein: P16104

H2AFX, Histone H2AX, humanhuman

Predicted RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFXP16104 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.58■□□□□ 0.08
H2AFXP16104 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC15.58■□□□□ 0.08
H2AFXP16104 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.58■□□□□ 0.08
H2AFXP16104 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 AC074338.1-201ENST00000416825 156 ntBASIC15.58■□□□□ 0.08
H2AFXP16104 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC15.58■□□□□ 0.08
H2AFXP16104 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.58■□□□□ 0.08
H2AFXP16104 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.58■□□□□ 0.08
H2AFXP16104 AC012640.2-201ENST00000561606 901 ntBASIC15.58■□□□□ 0.08
H2AFXP16104 AC096734.2-201ENST00000562054 433 ntBASIC15.58■□□□□ 0.08
H2AFXP16104 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC15.58■□□□□ 0.08
H2AFXP16104 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC15.58■□□□□ 0.08
H2AFXP16104 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC15.58■□□□□ 0.08
H2AFXP16104 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC15.58■□□□□ 0.08
H2AFXP16104 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 ADAM19-203ENST00000517905 3312 ntTSL 5 BASIC15.58■□□□□ 0.08
H2AFXP16104 NFATC2-207ENST00000610033 2740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC15.58■□□□□ 0.08
H2AFXP16104 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
H2AFXP16104 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC15.58■□□□□ 0.08
H2AFXP16104 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC15.58■□□□□ 0.08
H2AFXP16104 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC15.57■□□□□ 0.08
H2AFXP16104 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
H2AFXP16104 PROKR1-201ENST00000303786 4273 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
H2AFXP16104 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
H2AFXP16104 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
H2AFXP16104 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
H2AFXP16104 DCAF6-201ENST00000312263 3186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 ITGB2-205ENST00000397850 3178 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
H2AFXP16104 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
H2AFXP16104 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 AL445209.1-201ENST00000607269 3491 ntBASIC15.57■□□□□ 0.08
H2AFXP16104 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 NGLY1-205ENST00000417874 2062 ntTSL 2 BASIC15.57■□□□□ 0.08
H2AFXP16104 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.57■□□□□ 0.08
H2AFXP16104 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC15.57■□□□□ 0.08
H2AFXP16104 PP14571-201ENST00000404327 934 ntTSL 2 BASIC15.57■□□□□ 0.08
H2AFXP16104 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.57■□□□□ 0.08
H2AFXP16104 PCED1CP-201ENST00000419887 785 ntBASIC15.57■□□□□ 0.08
H2AFXP16104 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC15.57■□□□□ 0.08
H2AFXP16104 VN2R19P-201ENST00000442399 1052 ntBASIC15.57■□□□□ 0.08
H2AFXP16104 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.57■□□□□ 0.08
H2AFXP16104 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC15.57■□□□□ 0.08
H2AFXP16104 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.57■□□□□ 0.08
H2AFXP16104 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.57■□□□□ 0.08
H2AFXP16104 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.57■□□□□ 0.08
H2AFXP16104 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC15.57■□□□□ 0.08
H2AFXP16104 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
H2AFXP16104 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC15.57■□□□□ 0.08
H2AFXP16104 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC15.57■□□□□ 0.08
H2AFXP16104 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 MARK2P9-201ENST00000430958 1727 ntBASIC15.57■□□□□ 0.08
H2AFXP16104 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 RNASEH1-201ENST00000315212 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
H2AFXP16104 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2AFXP16104 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
H2AFXP16104 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2AFXP16104 FTO-214ENST00000636218 2227 ntTSL 5 BASIC15.56■□□□□ 0.08
H2AFXP16104 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2AFXP16104 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2AFXP16104 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
H2AFXP16104 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC15.56■□□□□ 0.08
H2AFXP16104 DYNC1I1-202ENST00000359388 2843 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2AFXP16104 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
H2AFXP16104 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
H2AFXP16104 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
H2AFXP16104 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
H2AFXP16104 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
H2AFXP16104 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC15.56■□□□□ 0.08
H2AFXP16104 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC15.56■□□□□ 0.08
H2AFXP16104 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC15.56■□□□□ 0.08
H2AFXP16104 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms