Protein–RNA interactions for Protein: P04035

HMGCR, 3-hydroxy-3-methylglutaryl-coenzyme A reductase, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCRP04035 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
HMGCRP04035 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGCRP04035 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGCRP04035 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HMGCRP04035 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
HMGCRP04035 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGCRP04035 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGCRP04035 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 AL583805.1-201ENST00000391389 531 ntBASIC16.79■□□□□ 0.28
HMGCRP04035 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
HMGCRP04035 RPL18AP3-201ENST00000462885 528 ntBASIC16.79■□□□□ 0.28
HMGCRP04035 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 AC141586.1-203ENST00000567242 366 ntBASIC16.79■□□□□ 0.28
HMGCRP04035 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGCRP04035 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGCRP04035 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.79■□□□□ 0.28
HMGCRP04035 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HMGCRP04035 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 AC127024.7-201ENST00000625101 200 ntBASIC16.79■□□□□ 0.28
HMGCRP04035 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
HMGCRP04035 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.79■□□□□ 0.28
HMGCRP04035 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
HMGCRP04035 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.79■□□□□ 0.28
HMGCRP04035 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
HMGCRP04035 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGCRP04035 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 MIR22HG-201ENST00000334146 1383 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HMGCRP04035 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGCRP04035 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
HMGCRP04035 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGCRP04035 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGCRP04035 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 AL118508.1-202ENST00000411595 709 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGCRP04035 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC16.78■□□□□ 0.28
HMGCRP04035 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC16.78■□□□□ 0.28
HMGCRP04035 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGCRP04035 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC16.78■□□□□ 0.28
HMGCRP04035 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 AC006122.1-201ENST00000493323 440 ntBASIC16.78■□□□□ 0.28
HMGCRP04035 AC108199.1-201ENST00000504249 508 ntTSL 3 BASIC16.78■□□□□ 0.28
HMGCRP04035 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.78■□□□□ 0.28
HMGCRP04035 AC093752.3-201ENST00000567343 901 ntBASIC16.78■□□□□ 0.28
HMGCRP04035 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
HMGCRP04035 SLC27A5-204ENST00000594786 643 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGCRP04035 UBA52-208ENST00000596304 554 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HMGCRP04035 AC087392.5-201ENST00000612517 489 ntBASIC16.78■□□□□ 0.28
HMGCRP04035 AL132780.4-201ENST00000624870 1135 ntBASIC16.78■□□□□ 0.28
HMGCRP04035 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGCRP04035 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 AC105917.1-201ENST00000506637 2539 ntBASIC16.78■□□□□ 0.28
HMGCRP04035 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.78■□□□□ 0.28
HMGCRP04035 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
HMGCRP04035 BABAM1-201ENST00000359435 1472 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 RAN-210ENST00000541630 1475 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGCRP04035 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
HMGCRP04035 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC16.78■□□□□ 0.28
HMGCRP04035 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
HMGCRP04035 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
HMGCRP04035 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 159.5 ms