Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 ZNF843-202ENST00000564218 3816 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
IFNA1P01562 MIR497HG-202ENST00000572453 3838 ntBASIC11.95□□□□□ -0.5
IFNA1P01562 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
IFNA1P01562 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 ALAS1-204ENST00000469224 2125 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC11.95□□□□□ -0.5
IFNA1P01562 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 ZNF407-201ENST00000299687 7948 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 YTHDC1-201ENST00000344157 6232 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
IFNA1P01562 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
IFNA1P01562 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC11.94□□□□□ -0.5
IFNA1P01562 PPP4R3B-203ENST00000611717 5243 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 SLC6A19-201ENST00000304460 5174 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC11.94□□□□□ -0.5
IFNA1P01562 CETP-203ENST00000566128 1733 ntTSL 5 BASIC11.94□□□□□ -0.5
IFNA1P01562 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.94□□□□□ -0.5
IFNA1P01562 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 HTR2C-201ENST00000276198 4751 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 AP003397.1-201ENST00000525706 1387 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC11.94□□□□□ -0.5
IFNA1P01562 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC11.94□□□□□ -0.5
IFNA1P01562 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
IFNA1P01562 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
IFNA1P01562 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC11.94□□□□□ -0.5
IFNA1P01562 ARMC5-201ENST00000268314 3612 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
IFNA1P01562 STARD13-202ENST00000336934 5917 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
IFNA1P01562 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC11.94□□□□□ -0.5
IFNA1P01562 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC11.94□□□□□ -0.5
IFNA1P01562 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC11.94□□□□□ -0.5
IFNA1P01562 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
IFNA1P01562 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC11.94□□□□□ -0.5
IFNA1P01562 AL139010.1-201ENST00000454878 894 ntBASIC11.94□□□□□ -0.5
IFNA1P01562 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC11.94□□□□□ -0.5
IFNA1P01562 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC11.94□□□□□ -0.5
IFNA1P01562 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC11.94□□□□□ -0.5
IFNA1P01562 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC11.94□□□□□ -0.5
IFNA1P01562 CEP78-205ENST00000424347 11198 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
IFNA1P01562 FANCA-202ENST00000389301 5451 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC11.94□□□□□ -0.5
IFNA1P01562 MEF2D-204ENST00000464356 5598 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
IFNA1P01562 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 PRR30-201ENST00000335524 2008 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC11.94□□□□□ -0.5
IFNA1P01562 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 STRA6-203ENST00000416286 2750 ntTSL 5 BASIC11.94□□□□□ -0.5
IFNA1P01562 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 LRSAM1-204ENST00000373324 3044 ntTSL 2 BASIC11.94□□□□□ -0.5
IFNA1P01562 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC11.94□□□□□ -0.5
IFNA1P01562 ADARB1-214ENST00000629643 4583 ntTSL 5 BASIC11.94□□□□□ -0.5
IFNA1P01562 FAM131B-203ENST00000409408 5856 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
IFNA1P01562 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
IFNA1P01562 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
IFNA1P01562 DNMT1-201ENST00000340748 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 MCF2L-204ENST00000375608 3648 ntTSL 5 BASIC11.93□□□□□ -0.5
IFNA1P01562 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 KIAA1549-202ENST00000440172 12379 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
IFNA1P01562 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC11.93□□□□□ -0.5
IFNA1P01562 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC11.93□□□□□ -0.5
IFNA1P01562 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC11.93□□□□□ -0.5
IFNA1P01562 AC090505.1-201ENST00000430515 1834 ntBASIC11.93□□□□□ -0.5
IFNA1P01562 SYDE1-201ENST00000342784 3264 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
IFNA1P01562 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC11.93□□□□□ -0.5
IFNA1P01562 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 CYP4F24P-201ENST00000586049 1580 ntBASIC11.93□□□□□ -0.5
IFNA1P01562 CD38-201ENST00000226279 5668 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC11.93□□□□□ -0.5
IFNA1P01562 ZNF77-201ENST00000314531 2002 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 PTPRK-207ENST00000368226 6087 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 OR1I1-202ENST00000641398 5984 ntAPPRIS P1 BASIC11.93□□□□□ -0.5
IFNA1P01562 LINC01782-201ENST00000591212 2908 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.93□□□□□ -0.5
IFNA1P01562 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 KRT18P27-201ENST00000427733 1299 ntBASIC11.93□□□□□ -0.5
IFNA1P01562 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
IFNA1P01562 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC11.93□□□□□ -0.5
IFNA1P01562 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
IFNA1P01562 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC11.93□□□□□ -0.5
IFNA1P01562 DET1-205ENST00000558413 583 ntTSL 4 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms