RNA–Protein interactions for RNA: ENST00000344157.8

YTHDC1-201, Transcript of YTH domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YTHDC1, Length 6,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YTHDC1-201ENST00000344157 DCAF8L2P0C7V8 631 aa20.25■□□□□ 0.83
YTHDC1-201ENST00000344157 PELP1Q8IZL8 1130 aaKnown RBP20.12■□□□□ 0.81
YTHDC1-201ENST00000344157 SUPT5HO00267 1087 aaKnown RBP19.53■□□□□ 0.72
YTHDC1-201ENST00000344157 ERICH6Q7L0X2 663 aa19.39■□□□□ 0.69
YTHDC1-201ENST00000344157 EHMT2Q96KQ7 1210 aa19.26■□□□□ 0.67
YTHDC1-201ENST00000344157 CCER1Q8TC90 406 aaPredicted RBP19.18■□□□□ 0.66
YTHDC1-201ENST00000344157 MYT1Q01538 1121 aa19.17■□□□□ 0.66
YTHDC1-201ENST00000344157 CENPBP07199 599 aaPredicted RBP19.09■□□□□ 0.65
YTHDC1-201ENST00000344157 APLP2Q06481 763 aa18.98■□□□□ 0.63
YTHDC1-201ENST00000344157 PCGF6Q9BYE7 350 aa18.84■□□□□ 0.61
YTHDC1-201ENST00000344157 TTBK1Q5TCY1 1321 aaPredicted RBP18.72■□□□□ 0.59
YTHDC1-201ENST00000344157 SHROOM4Q9ULL8 1493 aa18.71■□□□□ 0.59
YTHDC1-201ENST00000344157 NEFLP07196 543 aa18.69■□□□□ 0.58
YTHDC1-201ENST00000344157 ZEB1P37275 1124 aaPredicted RBP18.63■□□□□ 0.57
YTHDC1-201ENST00000344157 YTHDC1Q96MU7 727 aaKnown RBP18.56■□□□□ 0.56
YTHDC1-201ENST00000344157 FAM9AQ8IZU1 332 aaPredicted RBP18.56■□□□□ 0.56
YTHDC1-201ENST00000344157 DAXXQ9UER7 740 aaPredicted RBP18.34■□□□□ 0.53
YTHDC1-201ENST00000344157 RANGAP1P46060 587 aaPredicted RBP18.24■□□□□ 0.51
YTHDC1-201ENST00000344157 ATP1B4Q9UN42 357 aaPredicted RBP18.11■□□□□ 0.49
YTHDC1-201ENST00000344157 RTL5Q5HYW3 569 aaPredicted RBP18.03■□□□□ 0.48
YTHDC1-201ENST00000344157 TRIM41Q8WV44 630 aa17.95■□□□□ 0.46
YTHDC1-201ENST00000344157 UBTFP17480 764 aaKnown RBP17.9■□□□□ 0.46
YTHDC1-201ENST00000344157 HRCP23327 699 aa17.89■□□□□ 0.45
YTHDC1-201ENST00000344157 ZNF316A6NFI3 1004 aaPredicted RBP17.86■□□□□ 0.45
YTHDC1-201ENST00000344157 PPARGC1BQ86YN6 1023 aaKnown RBP17.82■□□□□ 0.44
YTHDC1-201ENST00000344157 POLR3GLQ9BT43 218 aa17.81■□□□□ 0.44
YTHDC1-201ENST00000344157 TRIM26Q12899 539 aaPredicted RBP17.74■□□□□ 0.43
YTHDC1-201ENST00000344157 CLSPNQ9HAW4 1339 aa17.74■□□□□ 0.43
YTHDC1-201ENST00000344157 CNGB1Q14028 1251 aaPredicted RBP17.7■□□□□ 0.42
YTHDC1-201ENST00000344157 ITGAEP38570 1179 aa17.57■□□□□ 0.4
YTHDC1-201ENST00000344157 MYT1LQ9UL68 1186 aa17.55■□□□□ 0.4
YTHDC1-201ENST00000344157 DIEXFQ68CQ4 756 aaKnown RBP17.49■□□□□ 0.39
YTHDC1-201ENST00000344157 NISCHQ9Y2I1 1504 aa17.49■□□□□ 0.39
YTHDC1-201ENST00000344157 BCANQ96GW7 911 aa17.48■□□□□ 0.39
YTHDC1-201ENST00000344157 HNRNPUL2Q1KMD3 747 aaKnown RBP17.44■□□□□ 0.38
YTHDC1-201ENST00000344157 GTF3C3Q9Y5Q9 886 aa17.43■□□□□ 0.38
YTHDC1-201ENST00000344157 EIF5BO60841 1220 aaKnown RBP17.43■□□□□ 0.38
YTHDC1-201ENST00000344157 SLC4A1APQ9BWU0 796 aaKnown RBP17.39■□□□□ 0.37
YTHDC1-201ENST00000344157 CDK11AQ9UQ88 783 aaPredicted RBP17.39■□□□□ 0.37
YTHDC1-201ENST00000344157 CHIC1Q5VXU3 224 aa17.38■□□□□ 0.37
YTHDC1-201ENST00000344157 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.29■□□□□ 0.36
YTHDC1-201ENST00000344157 GLIPR1L2Q4G1C9 344 aa17.23■□□□□ 0.35
YTHDC1-201ENST00000344157 ZBTB47Q9UFB7 747 aaPredicted RBP17.22■□□□□ 0.35
YTHDC1-201ENST00000344157 LOC105371045A0A1W2PR82 267 aa17.2■□□□□ 0.34
YTHDC1-201ENST00000344157 ANP32AP39687 249 aaKnown RBP17.16■□□□□ 0.34
YTHDC1-201ENST00000344157 BCL11AQ9H165 835 aa17.11■□□□□ 0.33
YTHDC1-201ENST00000344157 ANP32CO43423 234 aa17.09■□□□□ 0.33
YTHDC1-201ENST00000344157 ANP32BQ92688 251 aaKnown RBP17.08■□□□□ 0.32
YTHDC1-201ENST00000344157 NPM2Q86SE8 214 aaKnown RBP17.07■□□□□ 0.32
YTHDC1-201ENST00000344157 CANXP27824 592 aaKnown RBP17.03■□□□□ 0.32
YTHDC1-201ENST00000344157 ACIN1Q9UKV3 1341 aaKnown RBP17.02■□□□□ 0.32
YTHDC1-201ENST00000344157 NEUROD1Q13562 356 aa17.01■□□□□ 0.31
YTHDC1-201ENST00000344157 TRIM52Q96A61 297 aa16.95■□□□□ 0.3
YTHDC1-201ENST00000344157 FAM50AQ14320 339 aaKnown RBP16.93■□□□□ 0.3
YTHDC1-201ENST00000344157 ZNF326Q5BKZ1 582 aaKnown RBP16.9■□□□□ 0.3
YTHDC1-201ENST00000344157 HSP90AA1P07900 732 aaKnown RBP16.88■□□□□ 0.29
YTHDC1-201ENST00000344157 SLC24A1O60721 1099 aa16.88■□□□□ 0.29
YTHDC1-201ENST00000344157 NBR1Q14596 966 aa16.82■□□□□ 0.28
YTHDC1-201ENST00000344157 FKBP8Q14318 412 aa16.81■□□□□ 0.28
YTHDC1-201ENST00000344157 ARXQ96QS3 562 aa16.78■□□□□ 0.28
YTHDC1-201ENST00000344157 NEFMP07197 916 aa16.78■□□□□ 0.28
YTHDC1-201ENST00000344157 UPF2Q9HAU5 1272 aaKnown RBP16.76■□□□□ 0.27
YTHDC1-201ENST00000344157 TNNT2P45379 298 aaPredicted RBP16.6■□□□□ 0.25
YTHDC1-201ENST00000344157 HNRNPUQ00839 825 aaKnown RBP eCLIP16.58■□□□□ 0.25
YTHDC1-201ENST00000344157 CCDC136Q96JN2 1154 aa16.57■□□□□ 0.24
YTHDC1-201ENST00000344157 TRIM44Q96DX7 344 aaPredicted RBP16.52■□□□□ 0.23
YTHDC1-201ENST00000344157 FAM9BQ8IZU0 186 aa16.49■□□□□ 0.23
YTHDC1-201ENST00000344157 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.48■□□□□ 0.23
YTHDC1-201ENST00000344157 CDK11BP21127 795 aaKnown RBP16.48■□□□□ 0.23
YTHDC1-201ENST00000344157 SALL2Q9Y467 1007 aaPredicted RBP16.47■□□□□ 0.23
YTHDC1-201ENST00000344157 DDX10Q13206 875 aaKnown RBP16.4■□□□□ 0.22
YTHDC1-201ENST00000344157 SCAF1Q9H7N4 1312 aaKnown RBP16.39■□□□□ 0.21
YTHDC1-201ENST00000344157 PLPPR3Q6T4P5 718 aa16.39■□□□□ 0.21
YTHDC1-201ENST00000344157 ANP32EQ9BTT0 268 aa16.39■□□□□ 0.21
YTHDC1-201ENST00000344157 ERICH6BQ5W0A0 696 aa16.39■□□□□ 0.21
YTHDC1-201ENST00000344157 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
YTHDC1-201ENST00000344157 NAP1L5Q96NT1 182 aaPredicted RBP16.36■□□□□ 0.21
YTHDC1-201ENST00000344157 RTN4Q9NQC3 1192 aaKnown RBP16.36■□□□□ 0.21
YTHDC1-201ENST00000344157 NCLP19338 710 aaKnown RBP16.35■□□□□ 0.21
YTHDC1-201ENST00000344157 PTMAP06454 111 aaKnown RBP16.34■□□□□ 0.21
YTHDC1-201ENST00000344157 DNTTIP2Q5QJE6 756 aaKnown RBP16.34■□□□□ 0.21
YTHDC1-201ENST00000344157 BECN1Q14457 450 aa16.33■□□□□ 0.21
YTHDC1-201ENST00000344157 DDRGK1Q96HY6 314 aa16.33■□□□□ 0.21
YTHDC1-201ENST00000344157 GOLGA6L22H0YM25 854 aa16.32■□□□□ 0.2
YTHDC1-201ENST00000344157 TMC1Q8TDI8 760 aa16.32■□□□□ 0.2
YTHDC1-201ENST00000344157 TONSLQ96HA7 1378 aa16.27■□□□□ 0.2
YTHDC1-201ENST00000344157 FBLN2P98095 1184 aa16.26■□□□□ 0.19
YTHDC1-201ENST00000344157 MRS2Q9HD23 443 aa16.25■□□□□ 0.19
YTHDC1-201ENST00000344157 MYH16Q9H6N6 1097 aa16.23■□□□□ 0.19
YTHDC1-201ENST00000344157 WDR43Q15061 677 aaKnown RBP eCLIP16.22■□□□□ 0.19
YTHDC1-201ENST00000344157 PPM1GO15355 546 aaPredicted RBP16.22■□□□□ 0.19
YTHDC1-201ENST00000344157 AMER1Q5JTC6 1135 aaPredicted RBP16.21■□□□□ 0.19
YTHDC1-201ENST00000344157 ZRSR1Q15695 479 aaKnown RBP16.2■□□□□ 0.18
YTHDC1-201ENST00000344157 ARID3CA6NKF2 412 aa16.2■□□□□ 0.18
YTHDC1-201ENST00000344157 ZNF777Q9ULD5 760 aaPredicted RBP16.19■□□□□ 0.18
YTHDC1-201ENST00000344157 A0A0G2JS52 829 aa16.17■□□□□ 0.18
YTHDC1-201ENST00000344157 ESF1Q9H501 851 aaKnown RBP16.17■□□□□ 0.18
YTHDC1-201ENST00000344157 P3H3Q8IVL6 736 aa16.16■□□□□ 0.18
YTHDC1-201ENST00000344157 MIER1Q8N108 512 aa16.16■□□□□ 0.18
YTHDC1-201ENST00000344157 CHGAP10645 457 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms