Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 CDK4-206ENST00000549606 558 ntTSL 2 BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 ALDH4A1-206ENST00000538839 2957 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.93■□□□□ 0.3
SHC4Q6S5L8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 PGGT1BP2-201ENST00000398621 1028 ntBASIC16.92■□□□□ 0.3
SHC4Q6S5L8 AC236430.1-201ENST00000402231 743 ntBASIC16.92■□□□□ 0.3
SHC4Q6S5L8 AC007969.1-201ENST00000433675 447 ntBASIC16.92■□□□□ 0.3
SHC4Q6S5L8 AC002472.2-201ENST00000442739 958 ntBASIC16.92■□□□□ 0.3
SHC4Q6S5L8 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 AP001063.1-201ENST00000568332 529 ntBASIC16.92■□□□□ 0.3
SHC4Q6S5L8 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC16.92■□□□□ 0.3
SHC4Q6S5L8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SHC4Q6S5L8 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 RDX-218ENST00000544551 4117 ntTSL 2 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 RN7SKP230-201ENST00000365642 335 ntBASIC16.91■□□□□ 0.3
SHC4Q6S5L8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 FO681548.1-201ENST00000455617 1132 ntBASIC16.91■□□□□ 0.3
SHC4Q6S5L8 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 AC022137.2-201ENST00000503482 481 ntBASIC16.91■□□□□ 0.3
SHC4Q6S5L8 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 AC092364.2-202ENST00000597012 1073 ntBASIC16.91■□□□□ 0.3
SHC4Q6S5L8 RPSAP52-203ENST00000622976 1023 ntBASIC16.91■□□□□ 0.3
SHC4Q6S5L8 CU634019.7-201ENST00000624153 1185 ntBASIC16.91■□□□□ 0.3
SHC4Q6S5L8 FP236241.2-201ENST00000624906 1185 ntBASIC16.91■□□□□ 0.3
SHC4Q6S5L8 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SHC4Q6S5L8 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms