Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 AL627231.1-201ENST00000394467 1125 ntBASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 RN7SL67P-201ENST00000492147 296 ntBASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 HPN-206ENST00000597419 1212 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 AC138894.2-201ENST00000602838 371 ntBASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 AC051619.9-201ENST00000623237 597 ntBASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 DDX5-235ENST00000630471 473 ntTSL 4 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 AL805961.1-201ENST00000642026 753 ntBASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 MROH4P-201ENST00000431302 1578 ntBASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TRIM71Q2Q1W2 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 OXNAD1-202ENST00000435829 1643 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 FOS-201ENST00000303562 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 AC013726.1-201ENST00000563747 2285 ntBASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 LINC00322-201ENST00000450205 699 ntTSL 3 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 PFN2-206ENST00000461930 606 ntTSL 4 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 UBXN1-214ENST00000533000 367 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 MIR3677-201ENST00000578964 60 ntBASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 AC087045.2-201ENST00000606279 1003 ntBASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 AC092171.5-201ENST00000608012 942 ntBASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TRIM71Q2Q1W2 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 C18orf15-201ENST00000623680 2534 ntBASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 AC023024.2-201ENST00000623561 1993 ntBASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 RPSAP31-201ENST00000416648 895 ntBASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 AL035414.1-201ENST00000451327 857 ntBASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC16.22■□□□□ 0.19
TRIM71Q2Q1W2 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms