Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 AC004241.5-201ENST00000623870 2448 ntBASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 GOLGA6L17P-202ENST00000614358 1398 ntBASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 PTPN5-203ENST00000396168 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 KCNN1-201ENST00000222249 3625 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
NDUFAF3Q9BU61 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFAF3Q9BU61 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC11.77□□□□□ -0.52
NDUFAF3Q9BU61 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFAF3Q9BU61 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFAF3Q9BU61 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFAF3Q9BU61 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFAF3Q9BU61 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFAF3Q9BU61 AC114689.3-201ENST00000583687 2991 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFAF3Q9BU61 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
NDUFAF3Q9BU61 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFAF3Q9BU61 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFAF3Q9BU61 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
NDUFAF3Q9BU61 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 MMP14-201ENST00000311852 3732 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 TBC1D26-201ENST00000437605 1868 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 ATG14-201ENST00000247178 4742 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 TFAMP1-201ENST00000412727 736 ntBASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 HMGN1P19-201ENST00000436976 333 ntBASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 IGHV3-62-201ENST00000520057 340 ntBASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 RNF34-208ENST00000555076 593 ntTSL 3 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 RBM15-202ENST00000487146 3316 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 AC004846.1-201ENST00000554614 3050 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
NDUFAF3Q9BU61 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 PDE2A-206ENST00000444035 4193 ntAPPRIS ALT1 TSL 5 BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 AC015818.8-201ENST00000587907 1519 ntBASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 SNX19-211ENST00000533214 3096 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 AL592309.1-201ENST00000443127 649 ntBASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 FAM86GP-201ENST00000448322 971 ntBASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 AC093724.1-201ENST00000448659 1027 ntBASIC11.76□□□□□ -0.53
NDUFAF3Q9BU61 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC11.76□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms