Protein–RNA interactions for Protein: Q8IVE0

CROCCP3, Putative ciliary rootlet coiled-coil protein-like 2 protein, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3Q8IVE0 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.71□□□□□ -0.21
CROCCP3Q8IVE0 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CROCCP3Q8IVE0 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CROCCP3Q8IVE0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CROCCP3Q8IVE0 CICP1-201ENST00000416803 2410 ntBASIC13.71□□□□□ -0.22
CROCCP3Q8IVE0 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CROCCP3Q8IVE0 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
CROCCP3Q8IVE0 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CROCCP3Q8IVE0 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.71□□□□□ -0.22
CROCCP3Q8IVE0 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CROCCP3Q8IVE0 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CROCCP3Q8IVE0 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.22
CROCCP3Q8IVE0 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
CROCCP3Q8IVE0 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
CROCCP3Q8IVE0 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 POU2F2-216ENST00000560558 3282 ntTSL 5 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 PIP5K1B-208ENST00000541509 2664 ntTSL 2 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 MPZL2-201ENST00000278937 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 AC090505.1-201ENST00000430515 1834 ntBASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 CYGB-205ENST00000590175 830 ntTSL 3 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 BCL10-202ENST00000620248 774 ntTSL 5 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 CDK17-201ENST00000261211 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 STRCP1-201ENST00000509801 5328 ntBASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 AOC4P-203ENST00000566825 2289 ntBASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 AP000437.1-201ENST00000624057 2085 ntBASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 IER3-202ENST00000376377 1350 ntBASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 UNK-205ENST00000589666 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
CROCCP3Q8IVE0 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 AC024075.2-201ENST00000598112 1473 ntBASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 MEGF11-201ENST00000288745 5707 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 PRR3-202ENST00000376560 2254 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 DCHS1-201ENST00000299441 10765 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 PLD2-201ENST00000263088 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 PCED1CP-201ENST00000419887 785 ntBASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 AL513480.1-201ENST00000451731 511 ntBASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
CROCCP3Q8IVE0 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC13.69□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms