Protein–RNA interactions for Protein: Q6PIL6

KCNIP4, Kv channel-interacting protein 4, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP4Q6PIL6 AC020658.7-201ENST00000624274 2442 ntBASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 SLC25A6P2-201ENST00000497974 877 ntBASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 KRT18P31-201ENST00000506277 1292 ntBASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 AC139887.3-201ENST00000568585 713 ntBASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 AC008608.2-201ENST00000606089 416 ntBASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 AL732292.2-201ENST00000609649 430 ntBASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 AC129492.6-201ENST00000611383 1305 ntBASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 EPN2-202ENST00000347697 4664 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 HSPH1-204ENST00000445273 4987 ntTSL 2 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 AC012569.1-201ENST00000591191 1524 ntBASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 SF1-209ENST00000433274 2317 ntTSL 2 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 ARFGEF1-201ENST00000262215 7225 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC11.75□□□□□ -0.53
KCNIP4Q6PIL6 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 RALGPS1-201ENST00000259351 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 UBN1-202ENST00000396658 6336 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 CICP11-201ENST00000434745 2827 ntBASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 TMEM201-201ENST00000340305 3851 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 GPR179-204ENST00000621958 7983 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 USP38-201ENST00000307017 7009 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 BX005266.1-201ENST00000473402 457 ntBASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 CCDC117-201ENST00000249064 3985 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 PID1-202ENST00000392054 2745 ntTSL 2 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 CCDC57-203ENST00000392343 2896 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 DDX54-201ENST00000306014 4377 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 ITGA5-201ENST00000293379 4444 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 AL118506.1-201ENST00000601296 3082 ntBASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 BEGAIN-212ENST00000637716 3259 ntAPPRIS P5 TSL 5 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 RTL10-201ENST00000328554 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 RALGAPB-201ENST00000262879 8663 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 RALGAPB-203ENST00000397042 8652 ntAPPRIS ALT1 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 ZC3H18-201ENST00000301011 3729 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
KCNIP4Q6PIL6 IFITM10-201ENST00000340134 3706 ntAPPRIS P1 TSL 3 BASIC11.74□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms