Protein–RNA interactions for Protein: P23510

TNFSF4, Tumor necrosis factor ligand superfamily member 4, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4P23510 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.95□□□□□ -0.34
TNFSF4P23510 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC12.95□□□□□ -0.34
TNFSF4P23510 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC12.95□□□□□ -0.34
TNFSF4P23510 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.95□□□□□ -0.34
TNFSF4P23510 RAB43P1-201ENST00000561790 589 ntBASIC12.95□□□□□ -0.34
TNFSF4P23510 APOC4-201ENST00000591600 348 ntTSL 3 BASIC12.95□□□□□ -0.34
TNFSF4P23510 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC12.95□□□□□ -0.34
TNFSF4P23510 AL162274.1-201ENST00000617191 1098 ntBASIC12.95□□□□□ -0.34
TNFSF4P23510 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
TNFSF4P23510 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
TNFSF4P23510 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TNFSF4P23510 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TNFSF4P23510 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TNFSF4P23510 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TNFSF4P23510 REXO1L4P-201ENST00000605109 1937 ntBASIC12.95□□□□□ -0.34
TNFSF4P23510 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.95□□□□□ -0.34
TNFSF4P23510 PPT1-215ENST00000641471 2368 ntBASIC12.95□□□□□ -0.34
TNFSF4P23510 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TNFSF4P23510 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
TNFSF4P23510 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
TNFSF4P23510 AL109954.1-202ENST00000564051 2148 ntBASIC12.95□□□□□ -0.34
TNFSF4P23510 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
TNFSF4P23510 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
TNFSF4P23510 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
TNFSF4P23510 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC12.95□□□□□ -0.34
TNFSF4P23510 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
TNFSF4P23510 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC12.95□□□□□ -0.34
TNFSF4P23510 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 AC104581.4-201ENST00000623126 3052 ntBASIC12.94□□□□□ -0.34
TNFSF4P23510 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.94□□□□□ -0.34
TNFSF4P23510 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 KCNQ4-201ENST00000347132 4099 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
TNFSF4P23510 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC12.94□□□□□ -0.34
TNFSF4P23510 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC12.94□□□□□ -0.34
TNFSF4P23510 ADAR-202ENST00000368474 6625 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 AL360270.3-201ENST00000609118 1348 ntBASIC12.94□□□□□ -0.34
TNFSF4P23510 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
TNFSF4P23510 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC12.94□□□□□ -0.34
TNFSF4P23510 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TNFSF4P23510 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.94□□□□□ -0.34
TNFSF4P23510 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.94□□□□□ -0.34
TNFSF4P23510 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
TNFSF4P23510 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
TNFSF4P23510 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 LBX2-201ENST00000341396 886 ntTSL 3 BASIC12.94□□□□□ -0.34
TNFSF4P23510 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC12.94□□□□□ -0.34
TNFSF4P23510 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.94□□□□□ -0.34
TNFSF4P23510 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC12.94□□□□□ -0.34
TNFSF4P23510 BCRP2-202ENST00000447763 634 ntBASIC12.94□□□□□ -0.34
TNFSF4P23510 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
TNFSF4P23510 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.94□□□□□ -0.34
TNFSF4P23510 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.94□□□□□ -0.34
TNFSF4P23510 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.94□□□□□ -0.34
TNFSF4P23510 BCRP6-201ENST00000510112 632 ntBASIC12.94□□□□□ -0.34
TNFSF4P23510 BCRP7-201ENST00000511549 544 ntBASIC12.94□□□□□ -0.34
TNFSF4P23510 AP001889.1-201ENST00000525414 633 ntBASIC12.94□□□□□ -0.34
TNFSF4P23510 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC12.94□□□□□ -0.34
TNFSF4P23510 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC12.94□□□□□ -0.34
TNFSF4P23510 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC12.94□□□□□ -0.34
TNFSF4P23510 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TNFSF4P23510 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC12.94□□□□□ -0.34
TNFSF4P23510 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC12.94□□□□□ -0.34
TNFSF4P23510 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 AC073347.1-201ENST00000421633 2643 ntBASIC12.94□□□□□ -0.34
TNFSF4P23510 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC12.94□□□□□ -0.34
TNFSF4P23510 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC12.94□□□□□ -0.34
TNFSF4P23510 HIC2-203ENST00000443632 6940 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC12.94□□□□□ -0.34
TNFSF4P23510 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
TNFSF4P23510 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
TNFSF4P23510 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
TNFSF4P23510 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 PDXK-210ENST00000468090 7297 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
TNFSF4P23510 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms