Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.51■□□□□ 0.07
ERCC2P18074 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 API5-203ENST00000455725 2257 ntTSL 2 BASIC15.51■□□□□ 0.07
ERCC2P18074 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC15.51■□□□□ 0.07
ERCC2P18074 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
ERCC2P18074 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
ERCC2P18074 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
ERCC2P18074 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
ERCC2P18074 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.5■□□□□ 0.07
ERCC2P18074 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC15.5■□□□□ 0.07
ERCC2P18074 AC099063.4-201ENST00000641099 1602 ntBASIC15.5■□□□□ 0.07
ERCC2P18074 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
ERCC2P18074 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.5■□□□□ 0.07
ERCC2P18074 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.5■□□□□ 0.07
ERCC2P18074 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
ERCC2P18074 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
ERCC2P18074 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC15.5■□□□□ 0.07
ERCC2P18074 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 KRT17P7-201ENST00000451704 1104 ntBASIC15.5■□□□□ 0.07
ERCC2P18074 CR383656.12-201ENST00000549567 513 ntBASIC15.5■□□□□ 0.07
ERCC2P18074 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.5■□□□□ 0.07
ERCC2P18074 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.5■□□□□ 0.07
ERCC2P18074 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.5■□□□□ 0.07
ERCC2P18074 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC15.5■□□□□ 0.07
ERCC2P18074 MYO15B-237ENST00000642007 4893 ntBASIC15.5■□□□□ 0.07
ERCC2P18074 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC15.5■□□□□ 0.07
ERCC2P18074 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
ERCC2P18074 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.5■□□□□ 0.07
ERCC2P18074 AC232323.1-201ENST00000540724 2099 ntBASIC15.5■□□□□ 0.07
ERCC2P18074 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
ERCC2P18074 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC15.5■□□□□ 0.07
ERCC2P18074 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC15.5■□□□□ 0.07
ERCC2P18074 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.5■□□□□ 0.07
ERCC2P18074 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC2P18074 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC2P18074 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC2P18074 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC15.49■□□□□ 0.07
ERCC2P18074 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.49■□□□□ 0.07
ERCC2P18074 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC2P18074 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC2P18074 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
ERCC2P18074 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC15.49■□□□□ 0.07
ERCC2P18074 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC15.49■□□□□ 0.07
ERCC2P18074 INTS4P1-203ENST00000641008 3683 ntBASIC15.49■□□□□ 0.07
ERCC2P18074 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC2P18074 POM121L8P-201ENST00000417732 1281 ntBASIC15.49■□□□□ 0.07
ERCC2P18074 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.49■□□□□ 0.07
ERCC2P18074 AC245100.3-201ENST00000441281 285 ntBASIC15.49■□□□□ 0.07
ERCC2P18074 POM121L9P-203ENST00000441984 1285 ntBASIC15.49■□□□□ 0.07
ERCC2P18074 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.49■□□□□ 0.07
ERCC2P18074 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC15.49■□□□□ 0.07
ERCC2P18074 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC15.49■□□□□ 0.07
ERCC2P18074 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.49■□□□□ 0.07
ERCC2P18074 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC15.49■□□□□ 0.07
ERCC2P18074 AC025279.2-201ENST00000569730 653 ntBASIC15.49■□□□□ 0.07
ERCC2P18074 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC15.49■□□□□ 0.07
ERCC2P18074 RN7SL48P-201ENST00000579283 293 ntBASIC15.49■□□□□ 0.07
ERCC2P18074 AL022328.1-201ENST00000610050 478 ntBASIC15.49■□□□□ 0.07
ERCC2P18074 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.49■□□□□ 0.07
ERCC2P18074 ENPP7P14-201ENST00000621765 1040 ntBASIC15.49■□□□□ 0.07
ERCC2P18074 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.49■□□□□ 0.07
ERCC2P18074 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC2P18074 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC2P18074 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC2P18074 MINK1-201ENST00000347992 4863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC2P18074 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC2P18074 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
ERCC2P18074 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.49■□□□□ 0.07
ERCC2P18074 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
ERCC2P18074 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
ERCC2P18074 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
ERCC2P18074 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC2P18074 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC2P18074 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
ERCC2P18074 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
ERCC2P18074 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
ERCC2P18074 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
ERCC2P18074 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
ERCC2P18074 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
ERCC2P18074 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms