Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-CO1P00395 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC15.49■□□□□ 0.07
MT-CO1P00395 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.49■□□□□ 0.07
MT-CO1P00395 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 CHL1-202ENST00000397491 5235 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-CO1P00395 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-CO1P00395 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 GABARAPL2-201ENST00000037243 1002 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 STX1A-203ENST00000395155 783 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-CO1P00395 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 HLA-V-201ENST00000429037 534 ntBASIC15.49■□□□□ 0.07
MT-CO1P00395 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-CO1P00395 CSF2RBP1-201ENST00000447905 391 ntBASIC15.49■□□□□ 0.07
MT-CO1P00395 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.49■□□□□ 0.07
MT-CO1P00395 AL590640.2-201ENST00000457038 527 ntBASIC15.49■□□□□ 0.07
MT-CO1P00395 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-CO1P00395 MFF-223ENST00000524634 647 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-CO1P00395 AC078819.1-201ENST00000547454 765 ntBASIC15.49■□□□□ 0.07
MT-CO1P00395 AC012085.1-201ENST00000548270 765 ntBASIC15.49■□□□□ 0.07
MT-CO1P00395 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.49■□□□□ 0.07
MT-CO1P00395 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC15.49■□□□□ 0.07
MT-CO1P00395 AC132938.4-201ENST00000623835 848 ntBASIC15.49■□□□□ 0.07
MT-CO1P00395 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC15.49■□□□□ 0.07
MT-CO1P00395 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
MT-CO1P00395 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
MT-CO1P00395 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 SUMO3-203ENST00000397898 1779 ntTSL 3 BASIC15.49■□□□□ 0.07
MT-CO1P00395 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.49■□□□□ 0.07
MT-CO1P00395 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
MT-CO1P00395 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 REXO1L2P-201ENST00000425429 2069 ntBASIC15.48■□□□□ 0.07
MT-CO1P00395 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.48■□□□□ 0.07
MT-CO1P00395 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC15.48■□□□□ 0.07
MT-CO1P00395 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
MT-CO1P00395 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC15.48■□□□□ 0.07
MT-CO1P00395 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
MT-CO1P00395 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.48■□□□□ 0.07
MT-CO1P00395 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 AC012508.2-201ENST00000567613 1472 ntBASIC15.48■□□□□ 0.07
MT-CO1P00395 COCH-203ENST00000460581 2688 ntTSL 2 BASIC15.48■□□□□ 0.07
MT-CO1P00395 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC15.48■□□□□ 0.07
MT-CO1P00395 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 GUK1-206ENST00000366723 845 ntTSL 5 BASIC15.48■□□□□ 0.07
MT-CO1P00395 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
MT-CO1P00395 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.48■□□□□ 0.07
MT-CO1P00395 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.48■□□□□ 0.07
MT-CO1P00395 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.48■□□□□ 0.07
MT-CO1P00395 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.48■□□□□ 0.07
MT-CO1P00395 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
MT-CO1P00395 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC15.48■□□□□ 0.07
MT-CO1P00395 LARP4-220ENST00000615080 856 ntTSL 5 BASIC15.48■□□□□ 0.07
MT-CO1P00395 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 SNX18-202ENST00000343017 3140 ntBASIC15.48■□□□□ 0.07
MT-CO1P00395 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
MT-CO1P00395 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 CCP110-201ENST00000381396 5446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC15.48■□□□□ 0.07
MT-CO1P00395 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC15.48■□□□□ 0.07
MT-CO1P00395 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC15.48■□□□□ 0.07
MT-CO1P00395 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC15.48■□□□□ 0.07
MT-CO1P00395 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
MT-CO1P00395 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.47■□□□□ 0.07
MT-CO1P00395 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
MT-CO1P00395 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.47■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms