Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM38O00635 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM38O00635 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM38O00635 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.24■□□□□ 0.03
TRIM38O00635 KRT90P-201ENST00000549264 1064 ntBASIC15.24■□□□□ 0.03
TRIM38O00635 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC15.24■□□□□ 0.03
TRIM38O00635 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM38O00635 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM38O00635 CYP2AB1P-202ENST00000454440 1456 ntBASIC15.24■□□□□ 0.03
TRIM38O00635 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM38O00635 TP73-209ENST00000603362 1668 ntTSL 5 BASIC15.24■□□□□ 0.03
TRIM38O00635 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM38O00635 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM38O00635 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM38O00635 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRIM38O00635 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM38O00635 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM38O00635 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
TRIM38O00635 DRD5P1-201ENST00000456605 1438 ntBASIC15.24■□□□□ 0.03
TRIM38O00635 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRIM38O00635 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM38O00635 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM38O00635 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
TRIM38O00635 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM38O00635 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
TRIM38O00635 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM38O00635 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM38O00635 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.24■□□□□ 0.03
TRIM38O00635 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM38O00635 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
TRIM38O00635 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRIM38O00635 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM38O00635 FOSL2-201ENST00000264716 6708 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM38O00635 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC15.23■□□□□ 0.03
TRIM38O00635 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM38O00635 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC15.23■□□□□ 0.03
TRIM38O00635 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
TRIM38O00635 NME2-201ENST00000393183 568 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM38O00635 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 YBX1P6-201ENST00000442962 1002 ntBASIC15.23■□□□□ 0.03
TRIM38O00635 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
TRIM38O00635 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM38O00635 CMC2-214ENST00000565925 640 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM38O00635 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM38O00635 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.23■□□□□ 0.03
TRIM38O00635 GNRHR2-203ENST00000581100 1187 ntBASIC15.23■□□□□ 0.03
TRIM38O00635 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 AC010328.2-201ENST00000597698 1111 ntBASIC15.23■□□□□ 0.03
TRIM38O00635 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC15.23■□□□□ 0.03
TRIM38O00635 AC009542.2-202ENST00000619004 1067 ntBASIC15.23■□□□□ 0.03
TRIM38O00635 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM38O00635 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM38O00635 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM38O00635 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM38O00635 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 AC148477.4-201ENST00000613430 1793 ntBASIC15.23■□□□□ 0.03
TRIM38O00635 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 AJ011931.1-201ENST00000618749 2492 ntBASIC15.23■□□□□ 0.03
TRIM38O00635 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC15.23■□□□□ 0.03
TRIM38O00635 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.23■□□□□ 0.03
TRIM38O00635 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
TRIM38O00635 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
TRIM38O00635 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
TRIM38O00635 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRIM38O00635 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM38O00635 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM38O00635 CNN1-202ENST00000535659 1527 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM38O00635 SEPT7-201ENST00000350320 4350 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
TRIM38O00635 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM38O00635 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM38O00635 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC15.22■□□□□ 0.03
TRIM38O00635 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.22■□□□□ 0.03
TRIM38O00635 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM38O00635 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRIM38O00635 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
TRIM38O00635 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM38O00635 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM38O00635 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM38O00635 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM38O00635 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TRIM38O00635 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TRIM38O00635 ACKR1-201ENST00000368121 1240 ntBASIC15.22■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms