Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
POLR1DQ9Y2S0 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
POLR1DQ9Y2S0 SESN3-203ENST00000536441 9558 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
POLR1DQ9Y2S0 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
POLR1DQ9Y2S0 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
POLR1DQ9Y2S0 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
POLR1DQ9Y2S0 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
POLR1DQ9Y2S0 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
POLR1DQ9Y2S0 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
POLR1DQ9Y2S0 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
POLR1DQ9Y2S0 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
POLR1DQ9Y2S0 GOLIM4-202ENST00000470487 4373 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
POLR1DQ9Y2S0 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
POLR1DQ9Y2S0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
POLR1DQ9Y2S0 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 ACE3P-201ENST00000423435 1973 ntBASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 REXO1L2P-201ENST00000425429 2069 ntBASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 AC004066.1-201ENST00000502488 802 ntBASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 SAMD11P1-201ENST00000571429 661 ntBASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 AC008738.7-201ENST00000609744 511 ntBASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 AC006538.3-201ENST00000612495 578 ntBASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 AL359258.3-201ENST00000622910 2331 ntBASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
POLR1DQ9Y2S0 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
POLR1DQ9Y2S0 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 42.8 ms