Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 AL512324.3-201ENST00000619383 882 ntBASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 COPS3-201ENST00000268717 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 AC079328.2-201ENST00000561241 3354 ntBASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 LRRC59-203ENST00000576448 1531 ntBASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
CNTNAP3Q9BZ76 AL512652.2-201ENST00000625156 1716 ntBASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 VPS54-201ENST00000272322 3463 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 AC148477.4-201ENST00000613430 1793 ntBASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 FAM3B-201ENST00000357985 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 RNASEK-204ENST00000552039 591 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 DUT-207ENST00000559416 635 ntTSL 2 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 NAT9-220ENST00000582870 896 ntTSL 5 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 Metazoa_SRP.127-201ENST00000614914 302 ntBASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 AC025262.2-201ENST00000623975 1056 ntBASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 AL162426.1-201ENST00000624141 743 ntBASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CNTNAP3Q9BZ76 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 AL365209.1-201ENST00000624418 6473 ntBASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 ACTL7A-201ENST00000333999 1494 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 USP4-203ENST00000415188 1454 ntTSL 3 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.34□□□□□ -0.11
CNTNAP3Q9BZ76 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms