RNA–Protein interactions for RNA: ENST00000518041.5

CHTF8-204, Transcript of chromosome transmission fidelity factor 8, humanhuman

TSL 2 BASIC

Gene CHTF8, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTF8-204ENST00000518041 NISCHQ9Y2I1 1504 aa33.73■■■□□ 2.99
CHTF8-204ENST00000518041 ABCC9O60706 1549 aa30.24■■■□□ 2.43
CHTF8-204ENST00000518041 CCDC180Q9P1Z9 1646 aa30.22■■■□□ 2.43
CHTF8-204ENST00000518041 RB1CC1Q8TDY2 1594 aa28.75■■■□□ 2.19
CHTF8-204ENST00000518041 NACADO15069 1562 aa28.54■■■□□ 2.16
CHTF8-204ENST00000518041 DCAF8L2P0C7V8 631 aa28.54■■■□□ 2.16
CHTF8-204ENST00000518041 DNAJC5BQ9UF47 199 aa28.25■■■□□ 2.11
CHTF8-204ENST00000518041 PABPN1Q86U42 306 aaKnown RBP eCLIP28.16■■■□□ 2.1
CHTF8-204ENST00000518041 UNC13AQ9UPW8 1703 aa28.12■■■□□ 2.09
CHTF8-204ENST00000518041 MYO15BQ96JP2 1530 aa28.11■■■□□ 2.09
CHTF8-204ENST00000518041 ZCCHC6Q5VYS8 1495 aaKnown RBP27.98■■■□□ 2.07
CHTF8-204ENST00000518041 BICRAQ9NZM4 1560 aa27.91■■■□□ 2.06
CHTF8-204ENST00000518041 DCAF1Q9Y4B6 1507 aa27.81■■■□□ 2.04
CHTF8-204ENST00000518041 SCRIBQ14160 1630 aa27.64■■■□□ 2.02
CHTF8-204ENST00000518041 SHROOM4Q9ULL8 1493 aa27.47■■□□□ 1.99
CHTF8-204ENST00000518041 CC2D2AQ9P2K1 1620 aa27.28■■□□□ 1.96
CHTF8-204ENST00000518041 EIF4G1Q04637 1599 aaKnown RBP27.22■■□□□ 1.95
CHTF8-204ENST00000518041 CECR2Q9BXF3 1484 aa27.19■■□□□ 1.94
CHTF8-204ENST00000518041 NCAPD3P42695 1498 aa26.33■■□□□ 1.81
CHTF8-204ENST00000518041 SMARCA4P51532 1647 aa26.32■■□□□ 1.8
CHTF8-204ENST00000518041 ATAD2BQ9ULI0 1458 aa26.3■■□□□ 1.8
CHTF8-204ENST00000518041 SMARCA2P51531 1590 aa26.24■■□□□ 1.79
CHTF8-204ENST00000518041 HMGXB3Q12766 1538 aa26.18■■□□□ 1.78
CHTF8-204ENST00000518041 BAZ1AQ9NRL2 1556 aaPredicted RBP26.17■■□□□ 1.78
CHTF8-204ENST00000518041 ERCC6Q03468 1493 aa26.11■■□□□ 1.77
CHTF8-204ENST00000518041 BAZ1BQ9UIG0 1483 aaKnown RBP26.09■■□□□ 1.77
CHTF8-204ENST00000518041 MROH2BQ7Z745 1585 aa26.03■■□□□ 1.76
CHTF8-204ENST00000518041 PEG3Q9GZU2 1588 aa26■■□□□ 1.75
CHTF8-204ENST00000518041 NESP48681 1621 aa25.99■■□□□ 1.75
CHTF8-204ENST00000518041 CUX2O14529 1486 aa25.95■■□□□ 1.74
CHTF8-204ENST00000518041 DNAJC5Q9H3Z4 198 aa25.84■■□□□ 1.73
CHTF8-204ENST00000518041 LAMC3Q9Y6N6 1575 aa25.76■■□□□ 1.71
CHTF8-204ENST00000518041 WIZO95785 1651 aa25.73■■□□□ 1.71
CHTF8-204ENST00000518041 THOC2Q8NI27 1593 aaKnown RBP25.68■■□□□ 1.7
CHTF8-204ENST00000518041 KIF21AQ7Z4S6 1674 aa25.66■■□□□ 1.7
CHTF8-204ENST00000518041 PDS5BQ9NTI5 1447 aa25.61■■□□□ 1.69
CHTF8-204ENST00000518041 CADPSQ9ULU8 1353 aa25.56■■□□□ 1.68
CHTF8-204ENST00000518041 RSF1Q96T23 1441 aaPredicted RBP25.49■■□□□ 1.67
CHTF8-204ENST00000518041 MRC2Q9UBG0 1479 aa25.41■■□□□ 1.66
CHTF8-204ENST00000518041 TOP2AP11388 1531 aaKnown RBP25.38■■□□□ 1.65
CHTF8-204ENST00000518041 CEP164Q9UPV0 1460 aa25.34■■□□□ 1.65
CHTF8-204ENST00000518041 WDR62O43379 1518 aa25.32■■□□□ 1.64
CHTF8-204ENST00000518041 FANCD2Q9BXW9 1451 aa25.31■■□□□ 1.64
CHTF8-204ENST00000518041 CFTRP13569 1480 aa25.28■■□□□ 1.64
CHTF8-204ENST00000518041 URB2Q14146 1524 aaKnown RBP25.11■■□□□ 1.61
CHTF8-204ENST00000518041 CCDC88BA6NC98 1476 aa25.1■■□□□ 1.61
CHTF8-204ENST00000518041 PRDM2Q13029 1718 aa25.06■■□□□ 1.6
CHTF8-204ENST00000518041 TRIM41Q8WV44 630 aa24.87■■□□□ 1.57
CHTF8-204ENST00000518041 TOPBP1Q92547 1522 aa24.84■■□□□ 1.57
CHTF8-204ENST00000518041 IFT140Q96RY7 1462 aa24.8■■□□□ 1.56
CHTF8-204ENST00000518041 ZNF608Q9ULD9 1512 aaPredicted RBP24.8■■□□□ 1.56
CHTF8-204ENST00000518041 OSCARQ8IYS5 282 aa24.79■■□□□ 1.56
CHTF8-204ENST00000518041 DNMBPQ6XZF7 1577 aa24.75■■□□□ 1.55
CHTF8-204ENST00000518041 ABCC8Q09428 1581 aa24.73■■□□□ 1.55
CHTF8-204ENST00000518041 EIF4G3O43432 1585 aaKnown RBP24.67■■□□□ 1.54
CHTF8-204ENST00000518041 TARBP1Q13395 1621 aaKnown RBP24.6■■□□□ 1.53
CHTF8-204ENST00000518041 POLA1P09884 1462 aaPredicted RBP24.59■■□□□ 1.53
CHTF8-204ENST00000518041 AQRO60306 1485 aaKnown RBP eCLIP24.58■■□□□ 1.52
CHTF8-204ENST00000518041 RAD54L2Q9Y4B4 1467 aa24.52■■□□□ 1.52
CHTF8-204ENST00000518041 SUPT5HO00267 1087 aaKnown RBP24.51■■□□□ 1.51
CHTF8-204ENST00000518041 RIMBP3CA6NJZ7 1639 aa24.5■■□□□ 1.51
CHTF8-204ENST00000518041 RIMBP3BA6NNM3 1639 aa24.5■■□□□ 1.51
CHTF8-204ENST00000518041 RIMBP3Q9UFD9 1639 aa24.5■■□□□ 1.51
CHTF8-204ENST00000518041 CHD1O14646 1710 aa24.48■■□□□ 1.51
CHTF8-204ENST00000518041 SOGA1O94964 1423 aa24.47■■□□□ 1.51
CHTF8-204ENST00000518041 FGD5Q6ZNL6 1462 aa24.46■■□□□ 1.51
CHTF8-204ENST00000518041 CUX1P39880 1505 aa24.45■■□□□ 1.5
CHTF8-204ENST00000518041 TDRD9Q8NDG6 1382 aaKnown RBP24.44■■□□□ 1.5
CHTF8-204ENST00000518041 FBLN2P98095 1184 aa24.44■■□□□ 1.5
CHTF8-204ENST00000518041 ARHGEF11O15085 1522 aa24.42■■□□□ 1.5
CHTF8-204ENST00000518041 SNAPC4Q5SXM2 1469 aa24.34■■□□□ 1.49
CHTF8-204ENST00000518041 WDR97A6NE52 1622 aa24.3■■□□□ 1.48
CHTF8-204ENST00000518041 CYB5RLQ6IPT4 315 aa24.25■■□□□ 1.47
CHTF8-204ENST00000518041 GRIN2BQ13224 1484 aa24.25■■□□□ 1.47
CHTF8-204ENST00000518041 MAGI1Q96QZ7 1491 aaPredicted RBP24.23■■□□□ 1.47
CHTF8-204ENST00000518041 CHMP7Q8WUX9 453 aaPredicted RBP24.22■■□□□ 1.47
CHTF8-204ENST00000518041 ARAP1Q96P48 1450 aa24.19■■□□□ 1.46
CHTF8-204ENST00000518041 PBRM1Q86U86 1689 aa24.19■■□□□ 1.46
CHTF8-204ENST00000518041 GAPVD1Q14C86 1478 aa24.18■■□□□ 1.46
CHTF8-204ENST00000518041 SYNJ1O43426 1573 aa24.16■■□□□ 1.46
CHTF8-204ENST00000518041 CLASP1Q7Z460 1538 aa24.15■■□□□ 1.46
CHTF8-204ENST00000518041 SYNJ2O15056 1496 aa24.15■■□□□ 1.46
CHTF8-204ENST00000518041 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
CHTF8-204ENST00000518041 ABCA5Q8WWZ7 1642 aa24.13■■□□□ 1.45
CHTF8-204ENST00000518041 WRNQ14191 1432 aaPredicted RBP eCLIP24.08■■□□□ 1.44
CHTF8-204ENST00000518041 TOP2BQ02880 1626 aa24.06■■□□□ 1.44
CHTF8-204ENST00000518041 BIVM-ERCC5R4GMW8 1640 aa24.06■■□□□ 1.44
CHTF8-204ENST00000518041 TRHP20396 242 aaPredicted RBP23.99■■□□□ 1.43
CHTF8-204ENST00000518041 ADAMTS12P58397 1594 aa23.95■■□□□ 1.43
CHTF8-204ENST00000518041 GRIN2AQ12879 1464 aa23.94■■□□□ 1.42
CHTF8-204ENST00000518041 CEP170Q5SW79 1584 aa23.87■■□□□ 1.41
CHTF8-204ENST00000518041 FHAD1B1AJZ9 1412 aa23.86■■□□□ 1.41
CHTF8-204ENST00000518041 ERICH3Q5RHP9 1530 aa23.84■■□□□ 1.41
CHTF8-204ENST00000518041 NUP160Q12769 1436 aa23.84■■□□□ 1.41
CHTF8-204ENST00000518041 ERCC6L2Q5T890 1561 aa23.83■■□□□ 1.41
CHTF8-204ENST00000518041 SHROOM2Q13796 1616 aa23.72■■□□□ 1.39
CHTF8-204ENST00000518041 PRG4Q92954 1404 aaPredicted RBP23.64■■□□□ 1.37
CHTF8-204ENST00000518041 RUSC2Q8N2Y8 1516 aa23.62■■□□□ 1.37
CHTF8-204ENST00000518041 JPH4Q96JJ6 628 aa23.6■■□□□ 1.37
CHTF8-204ENST00000518041 KIF27Q86VH2 1401 aa23.59■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 7.1 ms