Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 FAM86GP-201ENST00000448322 971 ntBASIC13.18□□□□□ -0.3
ATP1B3P54709 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.18□□□□□ -0.3
ATP1B3P54709 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC13.18□□□□□ -0.3
ATP1B3P54709 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC13.18□□□□□ -0.3
ATP1B3P54709 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC13.18□□□□□ -0.3
ATP1B3P54709 AC044860.1-202ENST00000559481 777 ntBASIC13.18□□□□□ -0.3
ATP1B3P54709 MPI-209ENST00000564003 1195 ntTSL 2 BASIC13.18□□□□□ -0.3
ATP1B3P54709 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.18□□□□□ -0.3
ATP1B3P54709 AL691403.2-201ENST00000618460 490 ntBASIC13.18□□□□□ -0.3
ATP1B3P54709 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC13.18□□□□□ -0.3
ATP1B3P54709 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.18□□□□□ -0.3
ATP1B3P54709 AC004461.2-201ENST00000629517 803 ntBASIC13.18□□□□□ -0.3
ATP1B3P54709 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 MN1-201ENST00000302326 7556 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.18□□□□□ -0.3
ATP1B3P54709 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
ATP1B3P54709 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
ATP1B3P54709 PPP4R4-201ENST00000304338 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 EHD4-201ENST00000220325 6416 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 RAB5C-201ENST00000346213 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC13.18□□□□□ -0.3
ATP1B3P54709 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC13.18□□□□□ -0.3
ATP1B3P54709 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
ATP1B3P54709 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.18□□□□□ -0.3
ATP1B3P54709 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
ATP1B3P54709 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ATP1B3P54709 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.17□□□□□ -0.3
ATP1B3P54709 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC13.17□□□□□ -0.3
ATP1B3P54709 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 AC136759.1-202ENST00000530858 2194 ntBASIC13.17□□□□□ -0.3
ATP1B3P54709 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ATP1B3P54709 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ATP1B3P54709 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC13.17□□□□□ -0.3
ATP1B3P54709 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ATP1B3P54709 ZNF890P-202ENST00000530367 1156 ntBASIC13.17□□□□□ -0.3
ATP1B3P54709 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 SSH2-210ENST00000582084 560 ntTSL 3 BASIC13.17□□□□□ -0.3
ATP1B3P54709 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC13.17□□□□□ -0.3
ATP1B3P54709 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC13.17□□□□□ -0.3
ATP1B3P54709 AL158211.3-201ENST00000607385 239 ntBASIC13.17□□□□□ -0.3
ATP1B3P54709 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.17□□□□□ -0.3
ATP1B3P54709 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.17□□□□□ -0.3
ATP1B3P54709 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
ATP1B3P54709 ADAM15-206ENST00000368412 2804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC13.17□□□□□ -0.3
ATP1B3P54709 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC13.17□□□□□ -0.3
ATP1B3P54709 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 ITGA6-202ENST00000409080 5306 ntTSL 2 BASIC13.17□□□□□ -0.3
ATP1B3P54709 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
ATP1B3P54709 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
ATP1B3P54709 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC13.17□□□□□ -0.3
ATP1B3P54709 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 REXO1L4P-201ENST00000605109 1937 ntBASIC13.17□□□□□ -0.3
ATP1B3P54709 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
ATP1B3P54709 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
ATP1B3P54709 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
ATP1B3P54709 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC13.16□□□□□ -0.3
ATP1B3P54709 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC13.16□□□□□ -0.3
ATP1B3P54709 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
ATP1B3P54709 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 AC126335.2-201ENST00000623362 4637 ntBASIC13.16□□□□□ -0.3
ATP1B3P54709 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
ATP1B3P54709 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms