Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.11□□□□□ -0.31
EFNB2P52799 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.11□□□□□ -0.31
EFNB2P52799 POLG2-201ENST00000539111 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB2P52799 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB2P52799 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
EFNB2P52799 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB2P52799 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
EFNB2P52799 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 AL359881.3-201ENST00000602640 1721 ntBASIC13.1□□□□□ -0.31
EFNB2P52799 TFDP1-201ENST00000375370 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 USP4-203ENST00000415188 1454 ntTSL 3 BASIC13.1□□□□□ -0.31
EFNB2P52799 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
EFNB2P52799 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
EFNB2P52799 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
EFNB2P52799 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
EFNB2P52799 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
EFNB2P52799 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
EFNB2P52799 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
EFNB2P52799 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB2P52799 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC13.1□□□□□ -0.31
EFNB2P52799 AL133267.1-201ENST00000398220 340 ntBASIC13.1□□□□□ -0.31
EFNB2P52799 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 TPT1P11-201ENST00000458482 498 ntBASIC13.1□□□□□ -0.31
EFNB2P52799 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB2P52799 INGX-202ENST00000489074 768 ntBASIC13.1□□□□□ -0.31
EFNB2P52799 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
EFNB2P52799 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB2P52799 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC13.1□□□□□ -0.31
EFNB2P52799 MIR6080-201ENST00000617359 66 ntBASIC13.1□□□□□ -0.31
EFNB2P52799 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
EFNB2P52799 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
EFNB2P52799 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.1□□□□□ -0.31
EFNB2P52799 ADAMTS2-201ENST00000251582 6754 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 AC023090.2-201ENST00000625182 2110 ntBASIC13.1□□□□□ -0.31
EFNB2P52799 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
EFNB2P52799 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
EFNB2P52799 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB2P52799 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB2P52799 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.1□□□□□ -0.31
EFNB2P52799 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNB2P52799 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNB2P52799 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNB2P52799 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
EFNB2P52799 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
EFNB2P52799 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
EFNB2P52799 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
EFNB2P52799 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC13.09□□□□□ -0.31
EFNB2P52799 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.09□□□□□ -0.31
EFNB2P52799 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNB2P52799 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC13.09□□□□□ -0.31
EFNB2P52799 NDUFV1-202ENST00000415352 1512 ntAPPRIS ALT1 TSL 2 BASIC13.09□□□□□ -0.31
EFNB2P52799 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.09□□□□□ -0.31
EFNB2P52799 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNB2P52799 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNB2P52799 TP73-209ENST00000603362 1668 ntTSL 5 BASIC13.09□□□□□ -0.31
EFNB2P52799 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.09□□□□□ -0.31
EFNB2P52799 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
EFNB2P52799 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.09□□□□□ -0.31
EFNB2P52799 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNB2P52799 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC13.09□□□□□ -0.31
EFNB2P52799 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
EFNB2P52799 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
EFNB2P52799 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
EFNB2P52799 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
EFNB2P52799 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
EFNB2P52799 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC13.09□□□□□ -0.31
EFNB2P52799 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
EFNB2P52799 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.09□□□□□ -0.31
EFNB2P52799 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.09□□□□□ -0.31
EFNB2P52799 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.09□□□□□ -0.31
EFNB2P52799 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC13.09□□□□□ -0.31
EFNB2P52799 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC13.09□□□□□ -0.31
EFNB2P52799 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC13.09□□□□□ -0.31
EFNB2P52799 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC13.09□□□□□ -0.31
EFNB2P52799 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms