Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.23□□□□□ -0.13
GABRA4P48169 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC14.23□□□□□ -0.13
GABRA4P48169 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC14.23□□□□□ -0.13
GABRA4P48169 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
GABRA4P48169 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 SMS-201ENST00000379404 1174 ntTSL 3 BASIC14.23□□□□□ -0.13
GABRA4P48169 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC14.23□□□□□ -0.13
GABRA4P48169 MIR1247-201ENST00000408206 136 ntBASIC14.23□□□□□ -0.13
GABRA4P48169 AC010141.1-201ENST00000411585 623 ntBASIC14.23□□□□□ -0.13
GABRA4P48169 POM121L10P-201ENST00000436994 1285 ntBASIC14.23□□□□□ -0.13
GABRA4P48169 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC14.23□□□□□ -0.13
GABRA4P48169 CD74-212ENST00000524315 584 ntTSL 5 BASIC14.23□□□□□ -0.13
GABRA4P48169 AC131206.1-201ENST00000538078 1211 ntBASIC14.23□□□□□ -0.13
GABRA4P48169 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC14.23□□□□□ -0.13
GABRA4P48169 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.23□□□□□ -0.13
GABRA4P48169 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
GABRA4P48169 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC14.23□□□□□ -0.13
GABRA4P48169 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
GABRA4P48169 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.23□□□□□ -0.13
GABRA4P48169 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.23□□□□□ -0.13
GABRA4P48169 MBP-202ENST00000355994 2772 ntTSL 5 BASIC14.23□□□□□ -0.13
GABRA4P48169 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC14.23□□□□□ -0.13
GABRA4P48169 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC14.23□□□□□ -0.13
GABRA4P48169 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.23□□□□□ -0.13
GABRA4P48169 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 HARS-202ENST00000415192 1401 ntTSL 2 BASIC14.23□□□□□ -0.13
GABRA4P48169 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC14.23□□□□□ -0.13
GABRA4P48169 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.23□□□□□ -0.13
GABRA4P48169 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
GABRA4P48169 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
GABRA4P48169 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.23□□□□□ -0.13
GABRA4P48169 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
GABRA4P48169 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
GABRA4P48169 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC14.22□□□□□ -0.13
GABRA4P48169 AC138904.3-201ENST00000635780 2681 ntTSL 5 BASIC14.22□□□□□ -0.13
GABRA4P48169 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 SALL4P5-201ENST00000419001 1760 ntBASIC14.22□□□□□ -0.13
GABRA4P48169 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC14.22□□□□□ -0.13
GABRA4P48169 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
GABRA4P48169 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.22□□□□□ -0.13
GABRA4P48169 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC14.22□□□□□ -0.13
GABRA4P48169 LINC00528-201ENST00000600723 2160 ntBASIC14.22□□□□□ -0.13
GABRA4P48169 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.22□□□□□ -0.13
GABRA4P48169 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
GABRA4P48169 KRTAP10-13P-201ENST00000412914 571 ntBASIC14.22□□□□□ -0.13
GABRA4P48169 AL021707.3-201ENST00000418803 527 ntTSL 5 BASIC14.22□□□□□ -0.13
GABRA4P48169 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
GABRA4P48169 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.22□□□□□ -0.13
GABRA4P48169 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC14.22□□□□□ -0.13
GABRA4P48169 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC14.22□□□□□ -0.13
GABRA4P48169 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.22□□□□□ -0.13
GABRA4P48169 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC14.22□□□□□ -0.13
GABRA4P48169 AC104640.1-201ENST00000562617 2109 ntBASIC14.22□□□□□ -0.13
GABRA4P48169 AC005730.2-201ENST00000564549 1184 ntBASIC14.22□□□□□ -0.13
GABRA4P48169 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC14.22□□□□□ -0.13
GABRA4P48169 BX088702.1-201ENST00000610784 235 ntBASIC14.22□□□□□ -0.13
GABRA4P48169 MIR6787-201ENST00000616675 61 ntBASIC14.22□□□□□ -0.13
GABRA4P48169 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
GABRA4P48169 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.22□□□□□ -0.13
GABRA4P48169 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.22□□□□□ -0.13
GABRA4P48169 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
GABRA4P48169 MECR-202ENST00000373791 2416 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms