Protein–RNA interactions for Protein: O95196

CSPG5, Chondroitin sulfate proteoglycan 5, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5O95196 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
CSPG5O95196 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
CSPG5O95196 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CSPG5O95196 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG5O95196 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG5O95196 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CSPG5O95196 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CSPG5O95196 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
CSPG5O95196 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG5O95196 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG5O95196 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG5O95196 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 NUDT1-203ENST00000356714 662 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG5O95196 CMC1-204ENST00000423894 549 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG5O95196 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG5O95196 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG5O95196 AC004066.1-201ENST00000502488 802 ntBASIC16.22■□□□□ 0.19
CSPG5O95196 WSPAR-201ENST00000513561 683 ntTSL 3 BASIC16.22■□□□□ 0.19
CSPG5O95196 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.22■□□□□ 0.19
CSPG5O95196 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG5O95196 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.22■□□□□ 0.19
CSPG5O95196 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG5O95196 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC16.22■□□□□ 0.19
CSPG5O95196 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC16.22■□□□□ 0.19
CSPG5O95196 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC16.22■□□□□ 0.19
CSPG5O95196 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
CSPG5O95196 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG5O95196 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG5O95196 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC16.22■□□□□ 0.19
CSPG5O95196 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CSPG5O95196 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CSPG5O95196 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.22■□□□□ 0.19
CSPG5O95196 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC16.22■□□□□ 0.19
CSPG5O95196 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CSPG5O95196 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CSPG5O95196 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 UBXN11-207ENST00000374223 1312 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CSPG5O95196 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 KRT8P14-201ENST00000414254 1442 ntBASIC16.21■□□□□ 0.19
CSPG5O95196 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
CSPG5O95196 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC16.21■□□□□ 0.19
CSPG5O95196 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC16.21■□□□□ 0.19
CSPG5O95196 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC16.21■□□□□ 0.19
CSPG5O95196 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.21■□□□□ 0.19
CSPG5O95196 IGLV3-15-201ENST00000518356 244 ntBASIC16.21■□□□□ 0.19
CSPG5O95196 AC022217.1-201ENST00000521069 738 ntBASIC16.21■□□□□ 0.19
CSPG5O95196 AC024681.1-201ENST00000521917 487 ntBASIC16.21■□□□□ 0.19
CSPG5O95196 NCK2-206ENST00000522586 490 ntTSL 5 BASIC16.21■□□□□ 0.19
CSPG5O95196 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC16.21■□□□□ 0.19
CSPG5O95196 SAP25-201ENST00000538735 837 ntAPPRIS P2 TSL 3 BASIC16.21■□□□□ 0.19
CSPG5O95196 AC025154.2-203ENST00000550214 1031 ntTSL 2 BASIC16.21■□□□□ 0.19
CSPG5O95196 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.21■□□□□ 0.19
CSPG5O95196 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 EPB41L3-202ENST00000342933 4270 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CSPG5O95196 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC16.21■□□□□ 0.19
CSPG5O95196 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CSPG5O95196 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CSPG5O95196 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.19
CSPG5O95196 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC16.21■□□□□ 0.19
CSPG5O95196 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC16.21■□□□□ 0.19
CSPG5O95196 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CSPG5O95196 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
CSPG5O95196 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.21■□□□□ 0.18
CSPG5O95196 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
CSPG5O95196 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
CSPG5O95196 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms