Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 AC023090.2-201ENST00000625182 2110 ntBASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 ARHGAP23P1-201ENST00000562773 1937 ntBASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRIM49D1C9J1S8 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 AL137783.1-201ENST00000623494 1896 ntBASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 AICDA-201ENST00000229335 2819 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 RPSAP43-201ENST00000402237 625 ntBASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 AC044860.1-202ENST00000559481 777 ntBASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 PHF24-201ENST00000242315 5718 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 GINS3-203ENST00000426538 1728 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRIM49D1C9J1S8 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM49D1C9J1S8 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRIM49D1C9J1S8 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM49D1C9J1S8 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM49D1C9J1S8 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.15■□□□□ 0.02
TRIM49D1C9J1S8 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM49D1C9J1S8 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRIM49D1C9J1S8 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 77.9 ms