Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 NAA60-208ENST00000570819 833 ntTSL 2 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 UBL5-208ENST00000593087 320 ntTSL 3 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 AC074044.1-201ENST00000609673 707 ntBASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 AJ011932.1-201ENST00000621707 465 ntBASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 MTHFR-210ENST00000641407 2387 ntBASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 AL031595.1-201ENST00000623969 4709 ntBASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
LIN7CQ9NUP9 PXDN-201ENST00000252804 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 AC113367.3-201ENST00000508316 1912 ntBASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 AC006001.2-201ENST00000448096 393 ntTSL 3 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 PRR29-204ENST00000577953 565 ntTSL 4 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 AC025048.3-201ENST00000590609 569 ntBASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 AC005702.4-201ENST00000618393 416 ntBASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 MALSU1-202ENST00000466681 3044 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 Z97205.2-201ENST00000564697 1639 ntBASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC12.62□□□□□ -0.39
LIN7CQ9NUP9 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 USP28-214ENST00000545540 3431 ntTSL 2 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
LIN7CQ9NUP9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms