Protein–RNA interactions for Protein: Q9GZT3

SLIRP, SRA stem-loop-interacting RNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRPQ9GZT3 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 TBC1D3E-201ENST00000621587 2076 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 ATP2C2-AS1-201ENST00000565700 2998 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 IDH3B-201ENST00000380843 1545 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
SLIRPQ9GZT3 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC13.27□□□□□ -0.28
SLIRPQ9GZT3 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLIRPQ9GZT3 RAB37-204ENST00000392613 2617 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.28
SLIRPQ9GZT3 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLIRPQ9GZT3 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLIRPQ9GZT3 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
SLIRPQ9GZT3 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLIRPQ9GZT3 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.27□□□□□ -0.28
SLIRPQ9GZT3 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLIRPQ9GZT3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLIRPQ9GZT3 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.27□□□□□ -0.28
SLIRPQ9GZT3 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.28
SLIRPQ9GZT3 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLIRPQ9GZT3 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLIRPQ9GZT3 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
SLIRPQ9GZT3 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 AC025181.2-201ENST00000606994 802 ntBASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 ALPP-201ENST00000392027 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 AC011840.2-201ENST00000563063 1520 ntBASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 FIBCD1-204ENST00000448616 3119 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 EPHX2-202ENST00000517536 1600 ntTSL 5 BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 AL162431.2-201ENST00000358073 2424 ntTSL 2 BASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 AL031719.1-201ENST00000623365 2587 ntBASIC13.27□□□□□ -0.29
SLIRPQ9GZT3 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 PTPN5-205ENST00000477854 2826 ntTSL 5 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 HOXA7-201ENST00000242159 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 BCL2-201ENST00000333681 3209 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 YY1AP1-208ENST00000361831 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 POM121L14P-201ENST00000406100 1558 ntBASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC13.26□□□□□ -0.29
SLIRPQ9GZT3 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC13.26□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms