Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 AC091133.3-201ENST00000504865 432 ntTSL 5 BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 LITAF-210ENST00000571976 548 ntTSL 2 BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 LITAF-214ENST00000574703 486 ntTSL 2 BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 RN7SL828P-201ENST00000607615 303 ntBASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 AC018529.1-201ENST00000613063 361 ntBASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 AF228730.6-201ENST00000641497 218 ntBASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 AC084121.3-201ENST00000641716 218 ntBASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 AC023794.5-201ENST00000564380 2157 ntBASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC13.49□□□□□ -0.25
NANOGP1Q8N7R0 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 SLC6A6P1-201ENST00000413933 1850 ntBASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 AC087386.2-201ENST00000623212 4637 ntBASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 CICP16-201ENST00000502609 2813 ntBASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 PAM-201ENST00000304400 3156 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 DENND5B-202ENST00000389082 9470 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 RMDN3-201ENST00000260385 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 AL356585.2-201ENST00000625078 2396 ntBASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 KRT18P56-201ENST00000507275 550 ntBASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 AGPS-201ENST00000264167 7764 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 C7orf57-204ENST00000435376 1925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 C7orf57-206ENST00000539619 1927 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 C8orf31-201ENST00000395172 1875 ntTSL 2 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
NANOGP1Q8N7R0 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 GOPC-201ENST00000052569 4590 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 AL591122.2-201ENST00000624125 1853 ntBASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
NANOGP1Q8N7R0 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms