Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB5BP61020 PSMC3-213ENST00000619920 1580 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC11.83□□□□□ -0.52
RAB5BP61020 ZEB2-234ENST00000636413 8984 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB5BP61020 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB5BP61020 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC11.83□□□□□ -0.52
RAB5BP61020 SLC11A1-201ENST00000233202 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
RAB5BP61020 P2RY8-201ENST00000381297 4198 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 REXO5-208ENST00000564274 2447 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RAB5BP61020 PRKCE-201ENST00000306156 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB5BP61020 RAB3IP-212ENST00000550536 9646 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC11.82□□□□□ -0.52
RAB5BP61020 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 C16orf62-215ENST00000542263 3138 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB5BP61020 HECW1-201ENST00000395891 9501 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 PCMTD1-208ENST00000544451 3697 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 MYRIP-201ENST00000302541 5077 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB5BP61020 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB5BP61020 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RAB5BP61020 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RAB5BP61020 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB5BP61020 RPS2P55-201ENST00000397318 883 ntBASIC11.82□□□□□ -0.52
RAB5BP61020 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC11.82□□□□□ -0.52
RAB5BP61020 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC11.82□□□□□ -0.52
RAB5BP61020 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RAB5BP61020 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB5BP61020 PER1-202ENST00000354903 3115 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB5BP61020 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 AC012313.8-201ENST00000595059 5402 ntBASIC11.82□□□□□ -0.52
RAB5BP61020 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
RAB5BP61020 GSTM3-201ENST00000256594 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 TRIM3-203ENST00000525074 3044 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RAB5BP61020 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 CELF4-218ENST00000591287 3757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 HDAC2-205ENST00000519065 9874 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 DOCK4-204ENST00000428084 7997 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
RAB5BP61020 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB5BP61020 DUSP14-205ENST00000614411 2207 ntAPPRIS P1 TSL 2 BASIC11.82□□□□□ -0.52
RAB5BP61020 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 FLII-221ENST00000578558 2377 ntTSL 5 BASIC11.82□□□□□ -0.52
RAB5BP61020 XRRA1-207ENST00000527087 2505 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
RAB5BP61020 ZNF773-205ENST00000599847 5832 ntTSL 2 BASIC11.82□□□□□ -0.52
RAB5BP61020 PIK3AP1-201ENST00000339364 4803 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB5BP61020 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB5BP61020 AC090505.1-201ENST00000430515 1834 ntBASIC11.81□□□□□ -0.52
RAB5BP61020 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB5BP61020 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB5BP61020 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB5BP61020 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB5BP61020 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB5BP61020 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC11.81□□□□□ -0.52
RAB5BP61020 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC11.81□□□□□ -0.52
RAB5BP61020 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB5BP61020 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB5BP61020 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB5BP61020 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC11.81□□□□□ -0.52
RAB5BP61020 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB5BP61020 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB5BP61020 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB5BP61020 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
RAB5BP61020 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB5BP61020 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC11.81□□□□□ -0.52
RAB5BP61020 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB5BP61020 AC006504.4-201ENST00000592118 1568 ntBASIC11.81□□□□□ -0.52
RAB5BP61020 PTPRN-202ENST00000409251 3622 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
RAB5BP61020 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC11.81□□□□□ -0.52
RAB5BP61020 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB5BP61020 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
RAB5BP61020 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms