Protein–RNA interactions for Protein: P30532

CHRNA5, Neuronal acetylcholine receptor subunit alpha-5, humanhuman

Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5P30532 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC18.2■□□□□ 0.5
CHRNA5P30532 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
CHRNA5P30532 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRNA5P30532 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC18.2■□□□□ 0.5
CHRNA5P30532 CMTM5-202ENST00000342473 725 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 CMTM5-205ENST00000397227 818 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 RBM14-204ENST00000409738 372 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 HNRNPA1P27-201ENST00000412087 955 ntBASIC18.2■□□□□ 0.5
CHRNA5P30532 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC18.2■□□□□ 0.5
CHRNA5P30532 DPY19L2P5-201ENST00000456300 331 ntBASIC18.2■□□□□ 0.5
CHRNA5P30532 RHEB-207ENST00000496004 744 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRNA5P30532 CMTM5-208ENST00000555731 831 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRNA5P30532 MIR4472-1-201ENST00000584349 80 ntBASIC18.2■□□□□ 0.5
CHRNA5P30532 DGAT2L7P-201ENST00000602462 744 ntBASIC18.2■□□□□ 0.5
CHRNA5P30532 AL022334.2-201ENST00000610000 484 ntBASIC18.2■□□□□ 0.5
CHRNA5P30532 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC18.2■□□□□ 0.5
CHRNA5P30532 AL451007.2-201ENST00000632004 563 ntBASIC18.2■□□□□ 0.5
CHRNA5P30532 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC18.2■□□□□ 0.5
CHRNA5P30532 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.2■□□□□ 0.5
CHRNA5P30532 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRNA5P30532 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRNA5P30532 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
CHRNA5P30532 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC18.2■□□□□ 0.5
CHRNA5P30532 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.2■□□□□ 0.5
CHRNA5P30532 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC18.2■□□□□ 0.5
CHRNA5P30532 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA5P30532 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA5P30532 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA5P30532 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA5P30532 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CHRNA5P30532 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA5P30532 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC18.19■□□□□ 0.5
CHRNA5P30532 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
CHRNA5P30532 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA5P30532 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA5P30532 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CHRNA5P30532 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
CHRNA5P30532 FSCN1-201ENST00000382361 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA5P30532 AQP7P5-201ENST00000428759 1049 ntBASIC18.19■□□□□ 0.5
CHRNA5P30532 AQP7P4-201ENST00000447083 1042 ntBASIC18.19■□□□□ 0.5
CHRNA5P30532 AQP7P2-201ENST00000453967 1041 ntBASIC18.19■□□□□ 0.5
CHRNA5P30532 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA5P30532 AC245884.1-201ENST00000457113 529 ntTSL 3 BASIC18.19■□□□□ 0.5
CHRNA5P30532 SH3BGR-209ENST00000458295 812 ntTSL 3 BASIC18.19■□□□□ 0.5
CHRNA5P30532 FBXL21-202ENST00000467490 1742 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA5P30532 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC18.19■□□□□ 0.5
CHRNA5P30532 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC18.19■□□□□ 0.5
CHRNA5P30532 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC18.19■□□□□ 0.5
CHRNA5P30532 AC131206.1-201ENST00000538078 1211 ntBASIC18.19■□□□□ 0.5
CHRNA5P30532 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC18.19■□□□□ 0.5
CHRNA5P30532 AP001029.1-201ENST00000589843 168 ntTSL 3 BASIC18.19■□□□□ 0.5
CHRNA5P30532 AC012073.1-201ENST00000606114 1108 ntBASIC18.19■□□□□ 0.5
CHRNA5P30532 AQP7P3-201ENST00000624547 1041 ntBASIC18.19■□□□□ 0.5
CHRNA5P30532 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA5P30532 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
CHRNA5P30532 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
CHRNA5P30532 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC18.19■□□□□ 0.5
CHRNA5P30532 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA5P30532 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC18.19■□□□□ 0.5
CHRNA5P30532 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA5P30532 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.19■□□□□ 0.5
CHRNA5P30532 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
CHRNA5P30532 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC18.19■□□□□ 0.5
CHRNA5P30532 CD1E-206ENST00000368161 1689 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA5P30532 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA5P30532 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRNA5P30532 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRNA5P30532 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC18.18■□□□□ 0.5
CHRNA5P30532 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA5P30532 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
CHRNA5P30532 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
CHRNA5P30532 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA5P30532 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
CHRNA5P30532 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
CHRNA5P30532 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA5P30532 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA5P30532 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA5P30532 KRT17P5-201ENST00000332088 839 ntBASIC18.18■□□□□ 0.5
CHRNA5P30532 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA5P30532 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
CHRNA5P30532 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRNA5P30532 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC18.18■□□□□ 0.5
CHRNA5P30532 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms