RNA–Protein interactions for RNA: ENST00000589843.1

AP001029.1-201, humanhuman

TSL 3 BASIC

Gene AP001029.1, Length 168 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001029.1-201ENST00000589843 NISCHQ9Y2I1 1504 aa33.4■■■□□ 2.94
AP001029.1-201ENST00000589843 ABCC9O60706 1549 aa30.98■■■□□ 2.55
AP001029.1-201ENST00000589843 CCDC180Q9P1Z9 1646 aa30.22■■■□□ 2.43
AP001029.1-201ENST00000589843 DNAJC5BQ9UF47 199 aa29.62■■■□□ 2.33
AP001029.1-201ENST00000589843 RB1CC1Q8TDY2 1594 aa29.08■■■□□ 2.25
AP001029.1-201ENST00000589843 PABPN1Q86U42 306 aaKnown RBP eCLIP28.76■■■□□ 2.19
AP001029.1-201ENST00000589843 NACADO15069 1562 aa28.69■■■□□ 2.18
AP001029.1-201ENST00000589843 DCAF8L2P0C7V8 631 aa28.57■■■□□ 2.16
AP001029.1-201ENST00000589843 UNC13AQ9UPW8 1703 aa28.56■■■□□ 2.16
AP001029.1-201ENST00000589843 BICRAQ9NZM4 1560 aa28.34■■■□□ 2.13
AP001029.1-201ENST00000589843 MYO15BQ96JP2 1530 aa28■■■□□ 2.07
AP001029.1-201ENST00000589843 CC2D2AQ9P2K1 1620 aa27.91■■■□□ 2.06
AP001029.1-201ENST00000589843 CECR2Q9BXF3 1484 aa27.9■■■□□ 2.06
AP001029.1-201ENST00000589843 SHROOM4Q9ULL8 1493 aa27.69■■■□□ 2.02
AP001029.1-201ENST00000589843 EIF4G1Q04637 1599 aaKnown RBP27.67■■■□□ 2.02
AP001029.1-201ENST00000589843 SCRIBQ14160 1630 aa27.66■■■□□ 2.02
AP001029.1-201ENST00000589843 ZCCHC6Q5VYS8 1495 aaKnown RBP27.57■■■□□ 2
AP001029.1-201ENST00000589843 DNAJC5Q9H3Z4 198 aa27.53■■■□□ 2
AP001029.1-201ENST00000589843 DCAF1Q9Y4B6 1507 aa27.45■■□□□ 1.98
AP001029.1-201ENST00000589843 CUX2O14529 1486 aa26.81■■□□□ 1.88
AP001029.1-201ENST00000589843 ERCC6Q03468 1493 aa26.74■■□□□ 1.87
AP001029.1-201ENST00000589843 NCAPD3P42695 1498 aa26.49■■□□□ 1.83
AP001029.1-201ENST00000589843 NESP48681 1621 aa26.46■■□□□ 1.83
AP001029.1-201ENST00000589843 ATAD2BQ9ULI0 1458 aa26.39■■□□□ 1.82
AP001029.1-201ENST00000589843 THOC2Q8NI27 1593 aaKnown RBP26.26■■□□□ 1.79
AP001029.1-201ENST00000589843 HMGXB3Q12766 1538 aa26.26■■□□□ 1.79
AP001029.1-201ENST00000589843 SMARCA4P51532 1647 aa26.24■■□□□ 1.79
AP001029.1-201ENST00000589843 SMARCA2P51531 1590 aa26.24■■□□□ 1.79
AP001029.1-201ENST00000589843 TRIM41Q8WV44 630 aa26.22■■□□□ 1.79
AP001029.1-201ENST00000589843 BAZ1BQ9UIG0 1483 aaKnown RBP26.11■■□□□ 1.77
AP001029.1-201ENST00000589843 KIF21AQ7Z4S6 1674 aa26.09■■□□□ 1.77
AP001029.1-201ENST00000589843 LAMC3Q9Y6N6 1575 aa26.03■■□□□ 1.76
AP001029.1-201ENST00000589843 BAZ1AQ9NRL2 1556 aaPredicted RBP25.95■■□□□ 1.75
AP001029.1-201ENST00000589843 PEG3Q9GZU2 1588 aa25.9■■□□□ 1.74
AP001029.1-201ENST00000589843 PDS5BQ9NTI5 1447 aa25.87■■□□□ 1.73
AP001029.1-201ENST00000589843 MROH2BQ7Z745 1585 aa25.81■■□□□ 1.72
AP001029.1-201ENST00000589843 MRC2Q9UBG0 1479 aa25.75■■□□□ 1.71
AP001029.1-201ENST00000589843 WDR62O43379 1518 aa25.71■■□□□ 1.71
AP001029.1-201ENST00000589843 CADPSQ9ULU8 1353 aa25.68■■□□□ 1.7
AP001029.1-201ENST00000589843 CEP164Q9UPV0 1460 aa25.53■■□□□ 1.68
AP001029.1-201ENST00000589843 WIZO95785 1651 aa25.5■■□□□ 1.67
AP001029.1-201ENST00000589843 OSCARQ8IYS5 282 aa25.48■■□□□ 1.67
AP001029.1-201ENST00000589843 FANCD2Q9BXW9 1451 aa25.45■■□□□ 1.66
AP001029.1-201ENST00000589843 RIMBP3CA6NJZ7 1639 aa25.35■■□□□ 1.65
AP001029.1-201ENST00000589843 RIMBP3BA6NNM3 1639 aa25.35■■□□□ 1.65
AP001029.1-201ENST00000589843 RIMBP3Q9UFD9 1639 aa25.35■■□□□ 1.65
AP001029.1-201ENST00000589843 URB2Q14146 1524 aaKnown RBP25.32■■□□□ 1.64
AP001029.1-201ENST00000589843 CFTRP13569 1480 aa25.26■■□□□ 1.63
AP001029.1-201ENST00000589843 ARHGEF11O15085 1522 aa25.17■■□□□ 1.62
AP001029.1-201ENST00000589843 ZNF608Q9ULD9 1512 aaPredicted RBP25.13■■□□□ 1.61
AP001029.1-201ENST00000589843 TOP2AP11388 1531 aaKnown RBP25.05■■□□□ 1.6
AP001029.1-201ENST00000589843 CYB5RLQ6IPT4 315 aa25.03■■□□□ 1.6
AP001029.1-201ENST00000589843 PRDM2Q13029 1718 aa25.01■■□□□ 1.59
AP001029.1-201ENST00000589843 IFT140Q96RY7 1462 aa25■■□□□ 1.59
AP001029.1-201ENST00000589843 RSF1Q96T23 1441 aaPredicted RBP24.99■■□□□ 1.59
AP001029.1-201ENST00000589843 TRHP20396 242 aaPredicted RBP24.97■■□□□ 1.59
AP001029.1-201ENST00000589843 EIF4G3O43432 1585 aaKnown RBP24.95■■□□□ 1.58
AP001029.1-201ENST00000589843 CHD1O14646 1710 aa24.92■■□□□ 1.58
AP001029.1-201ENST00000589843 TOPBP1Q92547 1522 aa24.91■■□□□ 1.58
AP001029.1-201ENST00000589843 ARAP1Q96P48 1450 aa24.9■■□□□ 1.58
AP001029.1-201ENST00000589843 AQRO60306 1485 aaKnown RBP eCLIP24.8■■□□□ 1.56
AP001029.1-201ENST00000589843 CCDC88BA6NC98 1476 aa24.79■■□□□ 1.56
AP001029.1-201ENST00000589843 FBLN2P98095 1184 aa24.78■■□□□ 1.56
AP001029.1-201ENST00000589843 DNMBPQ6XZF7 1577 aa24.74■■□□□ 1.55
AP001029.1-201ENST00000589843 TARBP1Q13395 1621 aaKnown RBP24.73■■□□□ 1.55
AP001029.1-201ENST00000589843 ABCC8Q09428 1581 aa24.67■■□□□ 1.54
AP001029.1-201ENST00000589843 AEBP2Q6ZN18 517 aaPredicted RBP24.66■■□□□ 1.54
AP001029.1-201ENST00000589843 POLA1P09884 1462 aaPredicted RBP24.61■■□□□ 1.53
AP001029.1-201ENST00000589843 RAD54L2Q9Y4B4 1467 aa24.59■■□□□ 1.53
AP001029.1-201ENST00000589843 CLASP1Q7Z460 1538 aa24.55■■□□□ 1.52
AP001029.1-201ENST00000589843 TDRD9Q8NDG6 1382 aaKnown RBP24.54■■□□□ 1.52
AP001029.1-201ENST00000589843 SNAPC4Q5SXM2 1469 aa24.54■■□□□ 1.52
AP001029.1-201ENST00000589843 SOGA1O94964 1423 aa24.46■■□□□ 1.51
AP001029.1-201ENST00000589843 SYNJ1O43426 1573 aa24.44■■□□□ 1.5
AP001029.1-201ENST00000589843 CHMP7Q8WUX9 453 aaPredicted RBP24.41■■□□□ 1.5
AP001029.1-201ENST00000589843 FGD5Q6ZNL6 1462 aa24.38■■□□□ 1.49
AP001029.1-201ENST00000589843 MAGI1Q96QZ7 1491 aaPredicted RBP24.35■■□□□ 1.49
AP001029.1-201ENST00000589843 GAPVD1Q14C86 1478 aa24.32■■□□□ 1.48
AP001029.1-201ENST00000589843 WDR97A6NE52 1622 aa24.31■■□□□ 1.48
AP001029.1-201ENST00000589843 SYNJ2O15056 1496 aa24.3■■□□□ 1.48
AP001029.1-201ENST00000589843 GRIN2BQ13224 1484 aa24.3■■□□□ 1.48
AP001029.1-201ENST00000589843 CUX1P39880 1505 aa24.28■■□□□ 1.48
AP001029.1-201ENST00000589843 PBRM1Q86U86 1689 aa24.26■■□□□ 1.47
AP001029.1-201ENST00000589843 ERCC6L2Q5T890 1561 aa24.22■■□□□ 1.47
AP001029.1-201ENST00000589843 ABCA5Q8WWZ7 1642 aa24.08■■□□□ 1.45
AP001029.1-201ENST00000589843 CEP170Q5SW79 1584 aa24.04■■□□□ 1.44
AP001029.1-201ENST00000589843 KIF13AQ9H1H9 1805 aa24.03■■□□□ 1.44
AP001029.1-201ENST00000589843 GRIN2AQ12879 1464 aa24.02■■□□□ 1.44
AP001029.1-201ENST00000589843 ABCA10Q8WWZ4 1543 aa24■■□□□ 1.43
AP001029.1-201ENST00000589843 ADAMTS12P58397 1594 aa23.96■■□□□ 1.43
AP001029.1-201ENST00000589843 NUP160Q12769 1436 aa23.93■■□□□ 1.42
AP001029.1-201ENST00000589843 SHROOM2Q13796 1616 aa23.92■■□□□ 1.42
AP001029.1-201ENST00000589843 FHAD1B1AJZ9 1412 aa23.79■■□□□ 1.4
AP001029.1-201ENST00000589843 PRG4Q92954 1404 aaPredicted RBP23.79■■□□□ 1.4
AP001029.1-201ENST00000589843 FAM69CQ0P6D2 419 aa23.78■■□□□ 1.4
AP001029.1-201ENST00000589843 WRNQ14191 1432 aaPredicted RBP eCLIP23.76■■□□□ 1.39
AP001029.1-201ENST00000589843 ABCC10Q5T3U5 1492 aa23.74■■□□□ 1.39
AP001029.1-201ENST00000589843 KDM4FA0A1W2PPD8 638 aa23.73■■□□□ 1.39
AP001029.1-201ENST00000589843 DIP2BQ9P265 1576 aa23.72■■□□□ 1.39
AP001029.1-201ENST00000589843 ILDR1Q86SU0 546 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 118.5 ms