Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 ATP6V1H-201ENST00000355221 2365 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC14.09□□□□□ -0.15
TNFRSF1BP20333 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.15
TNFRSF1BP20333 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TNFRSF1BP20333 TRIM17-203ENST00000366697 2652 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
TNFRSF1BP20333 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
TNFRSF1BP20333 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
TNFRSF1BP20333 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
TNFRSF1BP20333 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 OS9-207ENST00000439210 1946 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 WRB-204ENST00000398753 699 ntTSL 3 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 AC004461.2-201ENST00000629517 803 ntBASIC14.08□□□□□ -0.16
TNFRSF1BP20333 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 AL137783.1-201ENST00000623494 1896 ntBASIC14.08□□□□□ -0.16
TNFRSF1BP20333 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
TNFRSF1BP20333 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 LMX1B-201ENST00000355497 5809 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 POLL-206ENST00000370172 2308 ntTSL 2 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 TSEN15P1-201ENST00000423257 515 ntBASIC14.07□□□□□ -0.16
TNFRSF1BP20333 AC092580.3-201ENST00000430932 139 ntBASIC14.07□□□□□ -0.16
TNFRSF1BP20333 AC069120.2-201ENST00000524091 540 ntBASIC14.07□□□□□ -0.16
TNFRSF1BP20333 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 MPI-209ENST00000564003 1195 ntTSL 2 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 GRIA3-205ENST00000611689 936 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TNFRSF1BP20333 AL158212.4-201ENST00000624062 1286 ntBASIC14.07□□□□□ -0.16
TNFRSF1BP20333 AC023090.2-201ENST00000625182 2110 ntBASIC14.07□□□□□ -0.16
TNFRSF1BP20333 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 88.9 ms