Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 CALN1-201ENST00000329008 9243 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 CNN2P11-201ENST00000429351 262 ntBASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 ME2-201ENST00000321341 9415 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC130686.1-201ENST00000622936 2466 ntBASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 RDX-218ENST00000544551 4117 ntTSL 2 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
TRBV6-7A0A0A0MS04 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 KRT75-201ENST00000252245 2324 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 AL360270.3-201ENST00000609118 1348 ntBASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 AP006288.1-201ENST00000446065 395 ntBASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 HLA-J-203ENST00000494367 1087 ntBASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 DHDH-204ENST00000523250 634 ntTSL 5 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 TK2-221ENST00000620035 5060 ntTSL 2 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 MGC16275-201ENST00000499670 2501 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC097376.2-205ENST00000610159 5334 ntBASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 CEP170B-203ENST00000453495 6813 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 FOXRED2-201ENST00000216187 3933 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
TRBV6-7A0A0A0MS04 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 EPHX2-207ENST00000521400 3140 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
TRBV6-7A0A0A0MS04 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms