Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
PCDHB9Q9Y5E1 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC23.37■■□□□ 1.33
PCDHB9Q9Y5E1 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
PCDHB9Q9Y5E1 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB9Q9Y5E1 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHB9Q9Y5E1 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB9Q9Y5E1 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
PCDHB9Q9Y5E1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.36■■□□□ 1.33
PCDHB9Q9Y5E1 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
PCDHB9Q9Y5E1 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC23.35■■□□□ 1.33
PCDHB9Q9Y5E1 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC23.35■■□□□ 1.33
PCDHB9Q9Y5E1 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB9Q9Y5E1 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB9Q9Y5E1 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB9Q9Y5E1 MTDHP2-201ENST00000601468 714 ntBASIC23.35■■□□□ 1.33
PCDHB9Q9Y5E1 AL117332.1-201ENST00000622628 974 ntBASIC23.35■■□□□ 1.33
PCDHB9Q9Y5E1 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB9Q9Y5E1 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB9Q9Y5E1 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
PCDHB9Q9Y5E1 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 AC096631.2-201ENST00000436136 790 ntBASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 MIR6724-1-201ENST00000616420 92 ntBASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 MIR6724-2-201ENST00000616483 92 ntBASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 MIR6724-4-201ENST00000617390 92 ntBASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 AC110285.6-201ENST00000617652 491 ntBASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 MIR6724-3-201ENST00000622482 92 ntBASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 TMEM202-AS1-202ENST00000565181 2325 ntBASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.34■■□□□ 1.33
PCDHB9Q9Y5E1 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.33■■□□□ 1.33
PCDHB9Q9Y5E1 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.33■■□□□ 1.33
PCDHB9Q9Y5E1 LBH-205ENST00000407930 756 ntTSL 2 BASIC23.33■■□□□ 1.33
PCDHB9Q9Y5E1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC23.33■■□□□ 1.33
PCDHB9Q9Y5E1 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC23.32■■□□□ 1.32
PCDHB9Q9Y5E1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.32■■□□□ 1.32
PCDHB9Q9Y5E1 MIR3621-201ENST00000580529 85 ntBASIC23.32■■□□□ 1.32
PCDHB9Q9Y5E1 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB9Q9Y5E1 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.32■■□□□ 1.32
PCDHB9Q9Y5E1 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC23.32■■□□□ 1.32
PCDHB9Q9Y5E1 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.32■■□□□ 1.32
PCDHB9Q9Y5E1 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB9Q9Y5E1 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB9Q9Y5E1 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB9Q9Y5E1 EED-207ENST00000528180 1745 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHB9Q9Y5E1 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB9Q9Y5E1 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.31■■□□□ 1.32
PCDHB9Q9Y5E1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.31■■□□□ 1.32
PCDHB9Q9Y5E1 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC23.31■■□□□ 1.32
PCDHB9Q9Y5E1 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB9Q9Y5E1 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB9Q9Y5E1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
PCDHB9Q9Y5E1 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB9Q9Y5E1 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB9Q9Y5E1 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDHB9Q9Y5E1 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC23.3■■□□□ 1.32
PCDHB9Q9Y5E1 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB9Q9Y5E1 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB9Q9Y5E1 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC23.3■■□□□ 1.32
PCDHB9Q9Y5E1 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC23.3■■□□□ 1.32
PCDHB9Q9Y5E1 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC23.3■■□□□ 1.32
PCDHB9Q9Y5E1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.3■■□□□ 1.32
PCDHB9Q9Y5E1 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
PCDHB9Q9Y5E1 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC23.3■■□□□ 1.32
PCDHB9Q9Y5E1 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB9Q9Y5E1 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.29■■□□□ 1.32
PCDHB9Q9Y5E1 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC23.29■■□□□ 1.32
PCDHB9Q9Y5E1 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC23.29■■□□□ 1.32
PCDHB9Q9Y5E1 AL139125.2-201ENST00000623134 1869 ntBASIC23.28■■□□□ 1.32
PCDHB9Q9Y5E1 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHB9Q9Y5E1 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB9Q9Y5E1 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC23.28■■□□□ 1.32
PCDHB9Q9Y5E1 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
PCDHB9Q9Y5E1 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB9Q9Y5E1 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB9Q9Y5E1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
PCDHB9Q9Y5E1 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC23.28■■□□□ 1.32
PCDHB9Q9Y5E1 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC23.27■■□□□ 1.32
PCDHB9Q9Y5E1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB9Q9Y5E1 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB9Q9Y5E1 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB9Q9Y5E1 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC23.27■■□□□ 1.32
PCDHB9Q9Y5E1 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
PCDHB9Q9Y5E1 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB9Q9Y5E1 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
PCDHB9Q9Y5E1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHB9Q9Y5E1 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC23.26■■□□□ 1.31
PCDHB9Q9Y5E1 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC23.26■■□□□ 1.31
PCDHB9Q9Y5E1 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
PCDHB9Q9Y5E1 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.26■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms