Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
PCDHB16Q9NRJ7 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB16Q9NRJ7 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB16Q9NRJ7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
PCDHB16Q9NRJ7 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB16Q9NRJ7 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB16Q9NRJ7 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB16Q9NRJ7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC19.79■□□□□ 0.76
PCDHB16Q9NRJ7 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB16Q9NRJ7 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.79■□□□□ 0.76
PCDHB16Q9NRJ7 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
PCDHB16Q9NRJ7 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB16Q9NRJ7 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.78■□□□□ 0.76
PCDHB16Q9NRJ7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB16Q9NRJ7 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB16Q9NRJ7 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB16Q9NRJ7 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC19.78■□□□□ 0.76
PCDHB16Q9NRJ7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
PCDHB16Q9NRJ7 AC018755.3-202ENST00000596210 929 ntBASIC19.78■□□□□ 0.76
PCDHB16Q9NRJ7 SHD-204ENST00000599689 1729 ntTSL 5 BASIC19.78■□□□□ 0.76
PCDHB16Q9NRJ7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB16Q9NRJ7 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB16Q9NRJ7 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB16Q9NRJ7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
PCDHB16Q9NRJ7 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
PCDHB16Q9NRJ7 CASK-201ENST00000378154 2494 ntTSL 5 BASIC19.77■□□□□ 0.76
PCDHB16Q9NRJ7 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
PCDHB16Q9NRJ7 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
PCDHB16Q9NRJ7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB16Q9NRJ7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC19.76■□□□□ 0.75
PCDHB16Q9NRJ7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB16Q9NRJ7 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB16Q9NRJ7 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.76■□□□□ 0.75
PCDHB16Q9NRJ7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB16Q9NRJ7 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB16Q9NRJ7 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB16Q9NRJ7 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDHB16Q9NRJ7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.76■□□□□ 0.75
PCDHB16Q9NRJ7 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.76■□□□□ 0.75
PCDHB16Q9NRJ7 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB16Q9NRJ7 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB16Q9NRJ7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
PCDHB16Q9NRJ7 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
PCDHB16Q9NRJ7 AC004812.2-201ENST00000611079 2094 ntBASIC19.75■□□□□ 0.75
PCDHB16Q9NRJ7 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDHB16Q9NRJ7 AC009831.1-201ENST00000580420 1582 ntBASIC19.75■□□□□ 0.75
PCDHB16Q9NRJ7 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB16Q9NRJ7 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
PCDHB16Q9NRJ7 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB16Q9NRJ7 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB16Q9NRJ7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB16Q9NRJ7 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.75■□□□□ 0.75
PCDHB16Q9NRJ7 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
PCDHB16Q9NRJ7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
PCDHB16Q9NRJ7 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
PCDHB16Q9NRJ7 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
PCDHB16Q9NRJ7 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB16Q9NRJ7 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB16Q9NRJ7 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PCDHB16Q9NRJ7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB16Q9NRJ7 RARRES2P2-201ENST00000394842 485 ntBASIC19.73■□□□□ 0.75
PCDHB16Q9NRJ7 RPS2P7-201ENST00000447334 885 ntBASIC19.73■□□□□ 0.75
PCDHB16Q9NRJ7 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.73■□□□□ 0.75
PCDHB16Q9NRJ7 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB16Q9NRJ7 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.73■□□□□ 0.75
PCDHB16Q9NRJ7 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PCDHB16Q9NRJ7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
PCDHB16Q9NRJ7 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB16Q9NRJ7 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
PCDHB16Q9NRJ7 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHB16Q9NRJ7 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.72■□□□□ 0.75
PCDHB16Q9NRJ7 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB16Q9NRJ7 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PCDHB16Q9NRJ7 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.72■□□□□ 0.75
PCDHB16Q9NRJ7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB16Q9NRJ7 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB16Q9NRJ7 AL161729.1-201ENST00000604104 1402 ntBASIC19.71■□□□□ 0.75
PCDHB16Q9NRJ7 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB16Q9NRJ7 AL592295.1-201ENST00000400984 884 ntBASIC19.71■□□□□ 0.75
PCDHB16Q9NRJ7 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PCDHB16Q9NRJ7 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms