Protein–RNA interactions for Protein: Q8WWV3

RTN4IP1, Reticulon-4-interacting protein 1, mitochondrial, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4IP1Q8WWV3 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 AC129492.7-201ENST00000622992 756 ntBASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 BCL2L12-212ENST00000616144 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 NPAS1-208ENST00000602212 2117 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC19.24■□□□□ 0.67
RTN4IP1Q8WWV3 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4IP1Q8WWV3 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4IP1Q8WWV3 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4IP1Q8WWV3 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.23■□□□□ 0.67
RTN4IP1Q8WWV3 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4IP1Q8WWV3 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4IP1Q8WWV3 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RTN4IP1Q8WWV3 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4IP1Q8WWV3 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4IP1Q8WWV3 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4IP1Q8WWV3 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4IP1Q8WWV3 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
RTN4IP1Q8WWV3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4IP1Q8WWV3 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC19.22■□□□□ 0.67
RTN4IP1Q8WWV3 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC19.22■□□□□ 0.67
RTN4IP1Q8WWV3 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4IP1Q8WWV3 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4IP1Q8WWV3 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4IP1Q8WWV3 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.22■□□□□ 0.67
RTN4IP1Q8WWV3 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
RTN4IP1Q8WWV3 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4IP1Q8WWV3 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
RTN4IP1Q8WWV3 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.21■□□□□ 0.67
RTN4IP1Q8WWV3 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
RTN4IP1Q8WWV3 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4IP1Q8WWV3 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4IP1Q8WWV3 IDNK-203ENST00000405990 629 ntTSL 2 BASIC19.21■□□□□ 0.67
RTN4IP1Q8WWV3 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC19.21■□□□□ 0.67
RTN4IP1Q8WWV3 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
RTN4IP1Q8WWV3 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
RTN4IP1Q8WWV3 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4IP1Q8WWV3 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4IP1Q8WWV3 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4IP1Q8WWV3 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC19.21■□□□□ 0.67
RTN4IP1Q8WWV3 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
RTN4IP1Q8WWV3 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4IP1Q8WWV3 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC19.2■□□□□ 0.66
RTN4IP1Q8WWV3 RPS2P7-201ENST00000447334 885 ntBASIC19.2■□□□□ 0.66
RTN4IP1Q8WWV3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
RTN4IP1Q8WWV3 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
RTN4IP1Q8WWV3 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC19.2■□□□□ 0.66
RTN4IP1Q8WWV3 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4IP1Q8WWV3 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4IP1Q8WWV3 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4IP1Q8WWV3 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.19■□□□□ 0.66
RTN4IP1Q8WWV3 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
RTN4IP1Q8WWV3 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4IP1Q8WWV3 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4IP1Q8WWV3 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.19■□□□□ 0.66
RTN4IP1Q8WWV3 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4IP1Q8WWV3 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC19.19■□□□□ 0.66
RTN4IP1Q8WWV3 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4IP1Q8WWV3 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4IP1Q8WWV3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RTN4IP1Q8WWV3 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 SLC52A2-211ENST00000532887 2147 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RTN4IP1Q8WWV3 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4IP1Q8WWV3 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC19.17■□□□□ 0.66
RTN4IP1Q8WWV3 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC19.17■□□□□ 0.66
RTN4IP1Q8WWV3 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4IP1Q8WWV3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4IP1Q8WWV3 AC087393.1-201ENST00000582896 145 ntBASIC19.17■□□□□ 0.66
RTN4IP1Q8WWV3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4IP1Q8WWV3 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC19.17■□□□□ 0.66
RTN4IP1Q8WWV3 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4IP1Q8WWV3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4IP1Q8WWV3 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4IP1Q8WWV3 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RTN4IP1Q8WWV3 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RTN4IP1Q8WWV3 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.17■□□□□ 0.66
RTN4IP1Q8WWV3 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RTN4IP1Q8WWV3 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RTN4IP1Q8WWV3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC19.16■□□□□ 0.66
RTN4IP1Q8WWV3 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms