Protein–RNA interactions for Protein: Q8TB92

HMGCLL1, 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic, humanhuman

Predictions only

Length 370 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1Q8TB92 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
HMGCLL1Q8TB92 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
HMGCLL1Q8TB92 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCLL1Q8TB92 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCLL1Q8TB92 AL031848.2-201ENST00000607670 837 ntBASIC22.64■■□□□ 1.21
HMGCLL1Q8TB92 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.21
HMGCLL1Q8TB92 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC22.64■■□□□ 1.21
HMGCLL1Q8TB92 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.63■■□□□ 1.21
HMGCLL1Q8TB92 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.63■■□□□ 1.21
HMGCLL1Q8TB92 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCLL1Q8TB92 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC22.63■■□□□ 1.21
HMGCLL1Q8TB92 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC22.63■■□□□ 1.21
HMGCLL1Q8TB92 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.63■■□□□ 1.21
HMGCLL1Q8TB92 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCLL1Q8TB92 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCLL1Q8TB92 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
HMGCLL1Q8TB92 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCLL1Q8TB92 LSR-205ENST00000427250 1606 ntTSL 2 BASIC22.62■■□□□ 1.21
HMGCLL1Q8TB92 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
HMGCLL1Q8TB92 TK2-216ENST00000564917 1156 ntTSL 3 BASIC22.62■■□□□ 1.21
HMGCLL1Q8TB92 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.62■■□□□ 1.21
HMGCLL1Q8TB92 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
HMGCLL1Q8TB92 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
HMGCLL1Q8TB92 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC22.61■■□□□ 1.21
HMGCLL1Q8TB92 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
HMGCLL1Q8TB92 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
HMGCLL1Q8TB92 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCLL1Q8TB92 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
HMGCLL1Q8TB92 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCLL1Q8TB92 ABCB10P4-201ENST00000566803 2184 ntBASIC22.6■■□□□ 1.21
HMGCLL1Q8TB92 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC22.6■■□□□ 1.21
HMGCLL1Q8TB92 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCLL1Q8TB92 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
HMGCLL1Q8TB92 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC22.6■■□□□ 1.21
HMGCLL1Q8TB92 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HMGCLL1Q8TB92 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
HMGCLL1Q8TB92 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC22.59■■□□□ 1.21
HMGCLL1Q8TB92 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HMGCLL1Q8TB92 MIR4281-201ENST00000580852 62 ntBASIC22.59■■□□□ 1.21
HMGCLL1Q8TB92 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
HMGCLL1Q8TB92 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
HMGCLL1Q8TB92 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
HMGCLL1Q8TB92 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
HMGCLL1Q8TB92 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
HMGCLL1Q8TB92 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC22.58■■□□□ 1.2
HMGCLL1Q8TB92 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
HMGCLL1Q8TB92 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.2
HMGCLL1Q8TB92 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC22.58■■□□□ 1.2
HMGCLL1Q8TB92 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.58■■□□□ 1.2
HMGCLL1Q8TB92 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
HMGCLL1Q8TB92 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HMGCLL1Q8TB92 DUSP8P5-201ENST00000422884 1815 ntBASIC22.57■■□□□ 1.2
HMGCLL1Q8TB92 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.57■■□□□ 1.2
HMGCLL1Q8TB92 PRTG-204ENST00000561292 833 ntTSL 3 BASIC22.57■■□□□ 1.2
HMGCLL1Q8TB92 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
HMGCLL1Q8TB92 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
HMGCLL1Q8TB92 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.57■■□□□ 1.2
HMGCLL1Q8TB92 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCLL1Q8TB92 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC22.56■■□□□ 1.2
HMGCLL1Q8TB92 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
HMGCLL1Q8TB92 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.56■■□□□ 1.2
HMGCLL1Q8TB92 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.56■■□□□ 1.2
HMGCLL1Q8TB92 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC22.55■■□□□ 1.2
HMGCLL1Q8TB92 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
HMGCLL1Q8TB92 AL451085.2-201ENST00000605085 799 ntBASIC22.55■■□□□ 1.2
HMGCLL1Q8TB92 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC22.55■■□□□ 1.2
HMGCLL1Q8TB92 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.55■■□□□ 1.2
HMGCLL1Q8TB92 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
HMGCLL1Q8TB92 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCLL1Q8TB92 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCLL1Q8TB92 AC137630.3-201ENST00000607245 391 ntBASIC22.54■■□□□ 1.2
HMGCLL1Q8TB92 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
HMGCLL1Q8TB92 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC22.54■■□□□ 1.2
HMGCLL1Q8TB92 BOD1-202ENST00000311086 1562 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCLL1Q8TB92 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCLL1Q8TB92 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
HMGCLL1Q8TB92 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.54■■□□□ 1.2
HMGCLL1Q8TB92 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
HMGCLL1Q8TB92 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCLL1Q8TB92 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCLL1Q8TB92 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.53■■□□□ 1.2
HMGCLL1Q8TB92 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
HMGCLL1Q8TB92 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC22.53■■□□□ 1.2
HMGCLL1Q8TB92 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
HMGCLL1Q8TB92 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCLL1Q8TB92 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCLL1Q8TB92 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCLL1Q8TB92 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
HMGCLL1Q8TB92 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC22.52■■□□□ 1.2
HMGCLL1Q8TB92 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC22.52■■□□□ 1.2
HMGCLL1Q8TB92 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.19
HMGCLL1Q8TB92 PRR7-204ENST00000510492 1285 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
HMGCLL1Q8TB92 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.51■■□□□ 1.19
HMGCLL1Q8TB92 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
HMGCLL1Q8TB92 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC22.51■■□□□ 1.19
HMGCLL1Q8TB92 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
HMGCLL1Q8TB92 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.5■■□□□ 1.19
HMGCLL1Q8TB92 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC22.5■■□□□ 1.19
HMGCLL1Q8TB92 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
HMGCLL1Q8TB92 AC009299.2-201ENST00000482477 511 ntBASIC22.5■■□□□ 1.19
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms