Protein–RNA interactions for Protein: P23246

SFPQ, Splicing factor, proline- and glutamine-rich, humanhuman

Known RBP eCLIP

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQP23246 TBX2-AS1-204ENST00000591313 640 ntTSL 220.82■□□□□ 0.929e-7■■■□□ 14.8
SFPQP23246 TBX2-AS1-205ENST00000592009 330 ntTSL 318.36■□□□□ 0.539e-7■■■□□ 14.8
SFPQP23246 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC11.84□□□□□ -0.519e-7■■■□□ 14.8
SFPQP23246 MAGI1-207ENST00000470990 2138 ntTSL 1 (best)9□□□□□ -0.971e-6■■■□□ 14.8
SFPQP23246 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC24.93■■□□□ 1.582e-6■■■□□ 14.8
SFPQP23246 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC24.9■■□□□ 1.582e-6■■■□□ 14.8
SFPQP23246 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.572e-6■■■□□ 14.8
SFPQP23246 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.572e-6■■■□□ 14.8
SFPQP23246 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC24.32■■□□□ 1.482e-6■■■□□ 14.8
SFPQP23246 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC24.26■■□□□ 1.472e-6■■■□□ 14.8
SFPQP23246 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC24.13■■□□□ 1.452e-6■■■□□ 14.8
SFPQP23246 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.412e-6■■■□□ 14.8
SFPQP23246 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.82■□□□□ 0.922e-6■■■□□ 14.8
SFPQP23246 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC20.35■□□□□ 0.852e-6■■■□□ 14.8
SFPQP23246 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.89■□□□□ 0.772e-6■■■□□ 14.8
SFPQP23246 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.439e-13■■■□□ 14.8
SFPQP23246 PANK2-202ENST00000336066 1843 ntTSL 1 (best)27.2■■□□□ 1.959e-13■■■□□ 14.8
SFPQP23246 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.799e-13■■■□□ 14.8
SFPQP23246 PANK2-205ENST00000495692 967 ntTSL 321.42■■□□□ 1.029e-13■■■□□ 14.8
SFPQP23246 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC18.17■□□□□ 0.59e-13■■■□□ 14.8
SFPQP23246 PANK2-206ENST00000497424 4815 ntTSL 2 BASIC14.27□□□□□ -0.139e-13■■■□□ 14.8
SFPQP23246 PANK2-204ENST00000471830 622 ntTSL 36.99□□□□□ -1.299e-13■■■□□ 14.8
SFPQP23246 VGLL4-218ENST00000623028 728 ntTSL 520.9■□□□□ 0.942e-6■■■□□ 14.8
SFPQP23246 RBPJ-216ENST00000509158 555 ntTSL 222.93■■□□□ 1.261e-7■■■□□ 14.7
SFPQP23246 RBPJ-211ENST00000505958 758 ntTSL 518.51■□□□□ 0.551e-7■■■□□ 14.7
SFPQP23246 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.551e-7■■■□□ 14.7
SFPQP23246 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.51e-7■■■□□ 14.7
SFPQP23246 RBPJ-223ENST00000512671 795 ntTSL 217.32■□□□□ 0.361e-7■■■□□ 14.7
SFPQP23246 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.83■□□□□ 0.281e-7■■■□□ 14.7
SFPQP23246 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC15.25■□□□□ 0.031e-7■■■□□ 14.7
SFPQP23246 RBPJ-213ENST00000506956 566 ntTSL 414.21□□□□□ -0.131e-7■■■□□ 14.7
SFPQP23246 RBPJ-224ENST00000513182 537 ntTSL 49.3□□□□□ -0.921e-7■■■□□ 14.7
SFPQP23246 RBPJ-201ENST00000342295 5860 ntTSL 5 BASIC9.09□□□□□ -0.951e-7■■■□□ 14.7
SFPQP23246 RBPJ-222ENST00000512351 609 ntTSL 48□□□□□ -1.131e-7■■■□□ 14.7
SFPQP23246 RBPJ-214ENST00000507561 1689 ntTSL 1 (best) BASIC7.6□□□□□ -1.191e-7■■■□□ 14.7
SFPQP23246 RBPJ-225ENST00000514380 1519 ntTSL 27.17□□□□□ -1.261e-7■■■□□ 14.7
SFPQP23246 RBPJ-228ENST00000514730 569 ntTSL 57.06□□□□□ -1.281e-7■■■□□ 14.7
SFPQP23246 RBPJ-218ENST00000510778 716 ntTSL 54.75□□□□□ -1.651e-7■■■□□ 14.7
SFPQP23246 RBPJ-227ENST00000514675 578 ntTSL 54.58□□□□□ -1.681e-7■■■□□ 14.7
SFPQP23246 RBPJ-219ENST00000511401 577 ntTSL 54.16□□□□□ -1.741e-7■■■□□ 14.7
SFPQP23246 RBPJ-230ENST00000515023 388 ntTSL 53.86□□□□□ -1.791e-7■■■□□ 14.7
SFPQP23246 RBPJ-229ENST00000514807 340 ntTSL 33.6□□□□□ -1.831e-7■■■□□ 14.7
SFPQP23246 RBPJ-215ENST00000507574 607 ntTSL 53.59□□□□□ -1.831e-7■■■□□ 14.7
SFPQP23246 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC28.95■■■□□ 2.222e-6■■■□□ 14.7
SFPQP23246 CHD2-207ENST00000626782 2131 ntTSL 2 BASIC11.47□□□□□ -0.572e-6■■■□□ 14.7
SFPQP23246 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.732e-6■■■□□ 14.7
SFPQP23246 CHD2-206ENST00000625990 888 ntTSL 59.89□□□□□ -0.832e-6■■■□□ 14.7
SFPQP23246 AC013394.1-202ENST00000630790 4499 ntTSL 29.33□□□□□ -0.922e-6■■■□□ 14.7
SFPQP23246 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.92□□□□□ -1.142e-6■■■□□ 14.7
SFPQP23246 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC7.05□□□□□ -1.282e-6■■■□□ 14.7
SFPQP23246 CHD2-221ENST00000635856 4236 ntTSL 56.99□□□□□ -1.292e-6■■■□□ 14.7
SFPQP23246 CHD2-215ENST00000628375 3202 ntTSL 5 BASIC6.95□□□□□ -1.32e-6■■■□□ 14.7
SFPQP23246 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.16■□□□□ 0.982e-6■■■□□ 14.7
SFPQP23246 ABCD3-204ENST00000468860 661 ntTSL 320.22■□□□□ 0.832e-13■■■□□ 14.7
SFPQP23246 ABCD3-201ENST00000315713 884 ntTSL 1 (best) BASIC13.41□□□□□ -0.262e-13■■■□□ 14.7
SFPQP23246 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.052e-13■■■□□ 14.7
SFPQP23246 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.863e-7■■■□□ 14.7
SFPQP23246 NINL-203ENST00000422516 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.93■□□□□ 0.143e-7■■■□□ 14.7
SFPQP23246 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.622e-6■■■□□ 14.7
SFPQP23246 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.552e-6■■■□□ 14.7
SFPQP23246 SH3BP4-205ENST00000444916 570 ntTSL 415.77■□□□□ 0.122e-6■■■□□ 14.7
SFPQP23246 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.863e-6■■■□□ 14.7
SFPQP23246 TMEM45B-204ENST00000527754 888 ntTSL 58.23□□□□□ -1.093e-6■■■□□ 14.7
SFPQP23246 TMEM45B-205ENST00000529381 515 ntTSL 27.04□□□□□ -1.283e-6■■■□□ 14.7
SFPQP23246 TMEM45B-203ENST00000525709 247 ntTSL 56.44□□□□□ -1.383e-6■■■□□ 14.7
SFPQP23246 TGFBR3-203ENST00000417833 551 ntTSL 414.68□□□□□ -0.063e-6■■■□□ 14.7
SFPQP23246 UTRN-208ENST00000433557 354 ntTSL 424.42■■□□□ 1.58e-7■■■□□ 14.7
SFPQP23246 ATXN1-210ENST00000498374 1648 ntTSL 1 (best)8.47□□□□□ -1.056e-7■■■□□ 14.6
SFPQP23246 ATXN1-208ENST00000492857 647 ntTSL 45.22□□□□□ -1.576e-7■■■□□ 14.6
SFPQP23246 ATXN1-203ENST00000467008 3362 ntTSL 1 (best)3.38□□□□□ -1.876e-7■■■□□ 14.6
SFPQP23246 PDE4D-208ENST00000502484 2478 ntTSL 1 (best) BASIC9.22□□□□□ -0.932e-10■■■□□ 14.6
SFPQP23246 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.6□□□□□ -1.352e-10■■■□□ 14.6
SFPQP23246 PDE4D-217ENST00000509355 847 ntTSL 1 (best)5.65□□□□□ -1.52e-10■■■□□ 14.6
SFPQP23246 PDE4D-219ENST00000511382 581 ntTSL 45.52□□□□□ -1.532e-10■■■□□ 14.6
SFPQP23246 PDE4D-215ENST00000506510 558 ntTSL 45.51□□□□□ -1.532e-10■■■□□ 14.6
SFPQP23246 PDE4D-214ENST00000506024 599 ntTSL 44.63□□□□□ -1.672e-10■■■□□ 14.6
SFPQP23246 PDE4D-213ENST00000505507 577 ntTSL 43.96□□□□□ -1.782e-10■■■□□ 14.6
SFPQP23246 FARP1-224ENST00000598389 747 ntTSL 56.55□□□□□ -1.366e-7■■■□□ 14.6
SFPQP23246 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.94■■□□□ 1.265e-10■■■□□ 14.6
SFPQP23246 SLC16A3-209ENST00000580098 859 ntTSL 221.9■■□□□ 1.15e-10■■■□□ 14.6
SFPQP23246 SEPT9-243ENST00000592407 509 ntTSL 220.74■□□□□ 0.912e-7■■■□□ 14.6
SFPQP23246 BCL6-210ENST00000496823 1138 ntTSL 315.33■□□□□ 0.042e-8■■■□□ 14.6
SFPQP23246 BCL6-211ENST00000621333 3399 ntTSL 5 BASIC13.88□□□□□ -0.192e-8■■■□□ 14.6
SFPQP23246 BCL6-202ENST00000406870 3569 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.512e-8■■■□□ 14.6
SFPQP23246 BCL6-209ENST00000480458 342 ntTSL 59.18□□□□□ -0.942e-8■■■□□ 14.6
SFPQP23246 BCL6-207ENST00000470319 526 ntTSL 43.64□□□□□ -1.832e-8■■■□□ 14.6
SFPQP23246 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC20.9■□□□□ 0.942e-6■■■□□ 14.6
SFPQP23246 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.212e-6■■■□□ 14.6
SFPQP23246 SDC2-207ENST00000522911 677 ntTSL 3 BASIC10.58□□□□□ -0.722e-6■■■□□ 14.6
SFPQP23246 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.782e-6■■■□□ 14.6
SFPQP23246 TRPV1-207ENST00000572705 4166 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.572e-6■■■□□ 14.6
SFPQP23246 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.73■□□□□ 0.435e-7■■■□□ 14.6
SFPQP23246 C2orf48-202ENST00000619640 480 ntTSL 1 (best)16.93■□□□□ 0.35e-7■■■□□ 14.6
SFPQP23246 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC16.56■□□□□ 0.245e-7■■■□□ 14.6
SFPQP23246 ZFHX3-203ENST00000397992 13841 ntTSL 1 (best) BASIC10.86□□□□□ -0.671e-6■■■□□ 14.6
SFPQP23246 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC10.56□□□□□ -0.721e-6■■■□□ 14.6
SFPQP23246 ZFHX3-207ENST00000641206 16414 ntAPPRIS P1 BASIC8.98□□□□□ -0.971e-6■■■□□ 14.6
SFPQP23246 MAML2-201ENST00000524717 7106 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.296e-8■■■□□ 14.6
SFPQP23246 ZNF148-202ENST00000465763 566 ntTSL 49.72□□□□□ -0.852e-7■■□□□ 14.5
SFPQP23246 PVT1-219ENST00000523427 938 ntTSL 3 BASIC29.15■■■□□ 2.266e-6■■□□□ 14.5
Retrieved 100 of 4,991 protein–RNA pairs in 171.1 ms