RNA–Protein interactions for RNA: ENST00000509355.5

PDE4D-217, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 847 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-217ENST00000509355 AEBP2Q6ZN18 517 aaPredicted RBP30.52■■■□□ 2.48
PDE4D-217ENST00000509355 CHIC1Q5VXU3 224 aa29.34■■■□□ 2.29
PDE4D-217ENST00000509355 SENP3Q9H4L4 574 aaPredicted RBP25.87■■□□□ 1.73
PDE4D-217ENST00000509355 PHF23Q9BUL5 403 aaPredicted RBP25.81■■□□□ 1.72
PDE4D-217ENST00000509355 FOXD1Q16676 465 aa24.12■■□□□ 1.45
PDE4D-217ENST00000509355 PLPPR3Q6T4P5 718 aa23.58■■□□□ 1.37
PDE4D-217ENST00000509355 PPP6R1Q9UPN7 881 aa22.91■■□□□ 1.26
PDE4D-217ENST00000509355 ADRA2BP18089 450 aa22.79■■□□□ 1.24
PDE4D-217ENST00000509355 PIAS4Q8N2W9 510 aaPredicted RBP22.54■■□□□ 1.2
PDE4D-217ENST00000509355 MSH5O43196 834 aa22.35■■□□□ 1.17
PDE4D-217ENST00000509355 POTEDQ86YR6 584 aa21.36■■□□□ 1.01
PDE4D-217ENST00000509355 MAPK8IP2Q13387 824 aaPredicted RBP20.83■□□□□ 0.93
PDE4D-217ENST00000509355 SCAF1Q9H7N4 1312 aaKnown RBP20.78■□□□□ 0.92
PDE4D-217ENST00000509355 PPP4R3CPQ6ZMV5 832 aa20.73■□□□□ 0.91
PDE4D-217ENST00000509355 DMRT2Q9Y5R5 561 aa20.63■□□□□ 0.89
PDE4D-217ENST00000509355 CNKSR2Q8WXI2 1034 aa20.24■□□□□ 0.83
PDE4D-217ENST00000509355 HOXD11P31277 338 aaPredicted RBP20.07■□□□□ 0.8
PDE4D-217ENST00000509355 NCBP3Q53F19 620 aaKnown RBP20■□□□□ 0.79
PDE4D-217ENST00000509355 RNF216Q9NWF9 866 aaPredicted RBP19.99■□□□□ 0.79
PDE4D-217ENST00000509355 NPM3O75607 178 aaKnown RBP19.8■□□□□ 0.76
PDE4D-217ENST00000509355 KCNA4P22459 653 aa19.78■□□□□ 0.76
PDE4D-217ENST00000509355 DCAF8L1A6NGE4 600 aa19.74■□□□□ 0.75
PDE4D-217ENST00000509355 DNAJC5BQ9UF47 199 aa19.44■□□□□ 0.7
PDE4D-217ENST00000509355 RNF39Q9H2S5 420 aa19.17■□□□□ 0.66
PDE4D-217ENST00000509355 CACNB1Q02641 598 aaPredicted RBP19.08■□□□□ 0.64
PDE4D-217ENST00000509355 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.97■□□□□ 0.635e-6■■■■□ 19.5
PDE4D-217ENST00000509355 C1QBPQ07021 282 aaKnown RBP18.88■□□□□ 0.61
PDE4D-217ENST00000509355 SLC4A2P04920 1241 aa18.85■□□□□ 0.61
PDE4D-217ENST00000509355 U3KPZ7 1027 aaPredicted RBP18.72■□□□□ 0.59
PDE4D-217ENST00000509355 SLC4A1APQ9BWU0 796 aaKnown RBP18.69■□□□□ 0.58
PDE4D-217ENST00000509355 SPINK5Q9NQ38 1064 aaPredicted RBP18.31■□□□□ 0.52
PDE4D-217ENST00000509355 FOXD4L1Q9NU39 408 aa18.29■□□□□ 0.52
PDE4D-217ENST00000509355 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.25■□□□□ 0.51
PDE4D-217ENST00000509355 MYCNP04198 464 aaPredicted RBP18.25■□□□□ 0.51
PDE4D-217ENST00000509355 HNRNPUL2Q1KMD3 747 aaKnown RBP18.25■□□□□ 0.51
PDE4D-217ENST00000509355 ZBTB22O15209 634 aa18.24■□□□□ 0.51
PDE4D-217ENST00000509355 CAPN15O75808 1086 aa18.19■□□□□ 0.5
PDE4D-217ENST00000509355 SAMD1Q6SPF0 538 aaPredicted RBP18.18■□□□□ 0.5
PDE4D-217ENST00000509355 APLP2Q06481 763 aa18.12■□□□□ 0.49
PDE4D-217ENST00000509355 DSG3P32926 999 aa18.07■□□□□ 0.48
PDE4D-217ENST00000509355 ZNF219Q9P2Y4 722 aaPredicted RBP17.99■□□□□ 0.47
PDE4D-217ENST00000509355 TRHP20396 242 aaPredicted RBP17.97■□□□□ 0.47
PDE4D-217ENST00000509355 ATF5Q9Y2D1 282 aaPredicted RBP17.87■□□□□ 0.45
PDE4D-217ENST00000509355 ABCB7O75027 752 aa17.79■□□□□ 0.44
PDE4D-217ENST00000509355 CSRNP3Q8WYN3 585 aa17.76■□□□□ 0.43
PDE4D-217ENST00000509355 ATXN8OSP0DMR3 200 aa17.74■□□□□ 0.43
PDE4D-217ENST00000509355 POLA2Q14181 598 aa17.64■□□□□ 0.41
PDE4D-217ENST00000509355 EHMT2Q96KQ7 1210 aa17.6■□□□□ 0.41
PDE4D-217ENST00000509355 ZBTB12Q9Y330 459 aaPredicted RBP17.29■□□□□ 0.36
PDE4D-217ENST00000509355 RBM42Q9BTD8 480 aaKnown RBP17.16■□□□□ 0.34
PDE4D-217ENST00000509355 MKRN4PQ13434 485 aaPredicted RBP17.09■□□□□ 0.33
PDE4D-217ENST00000509355 OSCARQ8IYS5 282 aa17.04■□□□□ 0.32
PDE4D-217ENST00000509355 FBLN2P98095 1184 aa17.02■□□□□ 0.32
PDE4D-217ENST00000509355 AKT1S1Q96B36 256 aa16.9■□□□□ 0.3
PDE4D-217ENST00000509355 SPDYE2BA6NHP3 402 aa16.83■□□□□ 0.28
PDE4D-217ENST00000509355 SPDYE6P0CI01 402 aa16.83■□□□□ 0.28
PDE4D-217ENST00000509355 SPDYE2Q495Y8 402 aa16.83■□□□□ 0.28
PDE4D-217ENST00000509355 POTEHQ6S545 545 aa16.81■□□□□ 0.28
PDE4D-217ENST00000509355 REM2Q8IYK8 340 aaPredicted RBP16.75■□□□□ 0.27
PDE4D-217ENST00000509355 SSUH2Q9Y2M2 353 aa16.71■□□□□ 0.27
PDE4D-217ENST00000509355 CHRDL2Q6WN34 429 aa16.65■□□□□ 0.26
PDE4D-217ENST00000509355 ZNF692Q9BU19 519 aaPredicted RBP16.65■□□□□ 0.26
PDE4D-217ENST00000509355 PITPNM1O00562 1244 aa16.55■□□□□ 0.24
PDE4D-217ENST00000509355 PABPN1Q86U42 306 aaKnown RBP eCLIP16.43■□□□□ 0.22
PDE4D-217ENST00000509355 SPDYE1Q8NFV5 336 aaPredicted RBP16.41■□□□□ 0.22
PDE4D-217ENST00000509355 SPDYE4A6NLX3 237 aa16.39■□□□□ 0.21
PDE4D-217ENST00000509355 FXR2P51116 673 aaKnown RBP eCLIP16.38■□□□□ 0.21
PDE4D-217ENST00000509355 PIP4P2Q8N4L2 257 aa16.36■□□□□ 0.21
PDE4D-217ENST00000509355 CLEC11AQ9Y240 323 aa16.33■□□□□ 0.2
PDE4D-217ENST00000509355 PROM2Q8N271 834 aa16.21■□□□□ 0.19
PDE4D-217ENST00000509355 PRR29P0C7W0 189 aa16.11■□□□□ 0.17
PDE4D-217ENST00000509355 PRKAR2AP13861 404 aaKnown RBP16.09■□□□□ 0.17
PDE4D-217ENST00000509355 STAG3Q9UJ98 1225 aa16.07■□□□□ 0.16
PDE4D-217ENST00000509355 HAX1O00165 279 aa16.04■□□□□ 0.16
PDE4D-217ENST00000509355 CHADLQ6NUI6 762 aa16■□□□□ 0.15
PDE4D-217ENST00000509355 FKBP8Q14318 412 aa15.98■□□□□ 0.15
PDE4D-217ENST00000509355 CREBZFQ9NS37 354 aa15.91■□□□□ 0.14
PDE4D-217ENST00000509355 SP7Q8TDD2 431 aaPredicted RBP15.86■□□□□ 0.13
PDE4D-217ENST00000509355 EVX2Q03828 476 aa15.84■□□□□ 0.13
PDE4D-217ENST00000509355 FARP1Q9Y4F1 1045 aaPredicted RBP15.84■□□□□ 0.13
PDE4D-217ENST00000509355 C19orf67A6NJJ6 358 aa15.83■□□□□ 0.12
PDE4D-217ENST00000509355 MNX1P50219 401 aaPredicted RBP15.76■□□□□ 0.11
PDE4D-217ENST00000509355 CD44P16070 742 aaKnown RBP15.59■□□□□ 0.09
PDE4D-217ENST00000509355 MIER1Q8N108 512 aa15.55■□□□□ 0.08
PDE4D-217ENST00000509355 NPM1P06748 294 aaKnown RBP eCLIP15.53■□□□□ 0.08
PDE4D-217ENST00000509355 FBXO3Q9UK99 471 aa15.52■□□□□ 0.08
PDE4D-217ENST00000509355 GABBR2O75899 941 aa15.46■□□□□ 0.07
PDE4D-217ENST00000509355 PLCD3Q8N3E9 789 aa15.44■□□□□ 0.06
PDE4D-217ENST00000509355 ZNF579Q8NAF0 562 aaKnown RBP15.44■□□□□ 0.06
PDE4D-217ENST00000509355 ZRANB1Q9UGI0 708 aa15.43■□□□□ 0.06
PDE4D-217ENST00000509355 PLEKHG5O94827 1062 aa15.42■□□□□ 0.06
PDE4D-217ENST00000509355 VASPP50552 380 aaPredicted RBP15.36■□□□□ 0.05
PDE4D-217ENST00000509355 CLCN6P51797 869 aa15.36■□□□□ 0.05
PDE4D-217ENST00000509355 PAK3O75914 559 aaPredicted RBP15.34■□□□□ 0.05
PDE4D-217ENST00000509355 ZBTB47Q9UFB7 747 aaPredicted RBP15.33■□□□□ 0.04
PDE4D-217ENST00000509355 NUBP1P53384 320 aa15.32■□□□□ 0.04
PDE4D-217ENST00000509355 RASEFQ8IZ41 740 aa15.32■□□□□ 0.04
PDE4D-217ENST00000509355 PHF12Q96QT6 1004 aa15.28■□□□□ 0.04
PDE4D-217ENST00000509355 CCDC61Q9Y6R9 512 aa15.27■□□□□ 0.04
PDE4D-217ENST00000509355 TSPYL2Q9H2G4 693 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.3 ms