RNA–Protein interactions for RNA: ENST00000511382.1

PDE4D-219, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-219ENST00000511382 AEBP2Q6ZN18 517 aaPredicted RBP17.06■□□□□ 0.32
PDE4D-219ENST00000511382 CHIC1Q5VXU3 224 aa16.61■□□□□ 0.25
PDE4D-219ENST00000511382 PHF23Q9BUL5 403 aaPredicted RBP14.59□□□□□ -0.07
PDE4D-219ENST00000511382 SENP3Q9H4L4 574 aaPredicted RBP14.51□□□□□ -0.09
PDE4D-219ENST00000511382 PLPPR3Q6T4P5 718 aa13.48□□□□□ -0.25
PDE4D-219ENST00000511382 FOXD1Q16676 465 aa13.46□□□□□ -0.25
PDE4D-219ENST00000511382 NISCHQ9Y2I1 1504 aa13.03□□□□□ -0.32
PDE4D-219ENST00000511382 ADRA2BP18089 450 aa12.93□□□□□ -0.34
PDE4D-219ENST00000511382 PPP6R1Q9UPN7 881 aa12.91□□□□□ -0.34
PDE4D-219ENST00000511382 PIAS4Q8N2W9 510 aaPredicted RBP12.73□□□□□ -0.37
PDE4D-219ENST00000511382 MSH5O43196 834 aa12.45□□□□□ -0.42
PDE4D-219ENST00000511382 CCDC180Q9P1Z9 1646 aa11.95□□□□□ -0.5
PDE4D-219ENST00000511382 PPP4R3CPQ6ZMV5 832 aa11.88□□□□□ -0.51
PDE4D-219ENST00000511382 ABCC9O60706 1549 aa11.87□□□□□ -0.51
PDE4D-219ENST00000511382 SCAF1Q9H7N4 1312 aaKnown RBP11.84□□□□□ -0.51
PDE4D-219ENST00000511382 MAPK8IP2Q13387 824 aaPredicted RBP11.74□□□□□ -0.53
PDE4D-219ENST00000511382 NCBP3Q53F19 620 aaKnown RBP11.58□□□□□ -0.56
PDE4D-219ENST00000511382 DMRT2Q9Y5R5 561 aa11.56□□□□□ -0.56
PDE4D-219ENST00000511382 CNKSR2Q8WXI2 1034 aa11.55□□□□□ -0.56
PDE4D-219ENST00000511382 KCNA4P22459 653 aa11.53□□□□□ -0.56
PDE4D-219ENST00000511382 POTEDQ86YR6 584 aa11.44□□□□□ -0.58
PDE4D-219ENST00000511382 NPM3O75607 178 aaKnown RBP11.36□□□□□ -0.59
PDE4D-219ENST00000511382 RB1CC1Q8TDY2 1594 aa11.36□□□□□ -0.59
PDE4D-219ENST00000511382 DNAJC5BQ9UF47 199 aa11.34□□□□□ -0.59
PDE4D-219ENST00000511382 RNF216Q9NWF9 866 aaPredicted RBP11.32□□□□□ -0.6
PDE4D-219ENST00000511382 HOXD11P31277 338 aaPredicted RBP11.27□□□□□ -0.61
PDE4D-219ENST00000511382 UNC13AQ9UPW8 1703 aa11.26□□□□□ -0.61
PDE4D-219ENST00000511382 NACADO15069 1562 aa11.25□□□□□ -0.61
PDE4D-219ENST00000511382 DCAF8L1A6NGE4 600 aa11.17□□□□□ -0.62
PDE4D-219ENST00000511382 MYO15BQ96JP2 1530 aa11.12□□□□□ -0.63
PDE4D-219ENST00000511382 BICRAQ9NZM4 1560 aa11.09□□□□□ -0.63
PDE4D-219ENST00000511382 SLC4A1APQ9BWU0 796 aaKnown RBP11□□□□□ -0.65
PDE4D-219ENST00000511382 SHROOM4Q9ULL8 1493 aa10.99□□□□□ -0.65
PDE4D-219ENST00000511382 PABPN1Q86U42 306 aaKnown RBP eCLIP10.9□□□□□ -0.66
PDE4D-219ENST00000511382 DCAF1Q9Y4B6 1507 aa10.87□□□□□ -0.67
PDE4D-219ENST00000511382 CC2D2AQ9P2K1 1620 aa10.86□□□□□ -0.67
PDE4D-219ENST00000511382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.84□□□□□ -0.675e-6■■■■□ 19.5
PDE4D-219ENST00000511382 EIF4G1Q04637 1599 aaKnown RBP10.78□□□□□ -0.68
PDE4D-219ENST00000511382 ZCCHC6Q5VYS8 1495 aaKnown RBP10.78□□□□□ -0.68
PDE4D-219ENST00000511382 CECR2Q9BXF3 1484 aa10.77□□□□□ -0.69
PDE4D-219ENST00000511382 SLC4A2P04920 1241 aa10.73□□□□□ -0.69
PDE4D-219ENST00000511382 DCAF8L2P0C7V8 631 aa10.69□□□□□ -0.7
PDE4D-219ENST00000511382 SCRIBQ14160 1630 aa10.66□□□□□ -0.7
PDE4D-219ENST00000511382 EHMT2Q96KQ7 1210 aa10.65□□□□□ -0.7
PDE4D-219ENST00000511382 RNF39Q9H2S5 420 aa10.64□□□□□ -0.71
PDE4D-219ENST00000511382 FOXD4L1Q9NU39 408 aa10.64□□□□□ -0.71
PDE4D-219ENST00000511382 DNAJC5Q9H3Z4 198 aa10.62□□□□□ -0.71
PDE4D-219ENST00000511382 U3KPZ7 1027 aaPredicted RBP10.59□□□□□ -0.71
PDE4D-219ENST00000511382 ZBTB22O15209 634 aa10.58□□□□□ -0.72
PDE4D-219ENST00000511382 C1QBPQ07021 282 aaKnown RBP10.53□□□□□ -0.72
PDE4D-219ENST00000511382 MYCNP04198 464 aaPredicted RBP10.52□□□□□ -0.73
PDE4D-219ENST00000511382 CSRNP3Q8WYN3 585 aa10.49□□□□□ -0.73
PDE4D-219ENST00000511382 CACNB1Q02641 598 aaPredicted RBP10.48□□□□□ -0.73
PDE4D-219ENST00000511382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.47□□□□□ -0.73
PDE4D-219ENST00000511382 HNRNPUL2Q1KMD3 747 aaKnown RBP10.47□□□□□ -0.73
PDE4D-219ENST00000511382 CUX2O14529 1486 aa10.47□□□□□ -0.73
PDE4D-219ENST00000511382 SAMD1Q6SPF0 538 aaPredicted RBP10.43□□□□□ -0.74
PDE4D-219ENST00000511382 APLP2Q06481 763 aa10.38□□□□□ -0.75
PDE4D-219ENST00000511382 NCAPD3P42695 1498 aa10.36□□□□□ -0.75
PDE4D-219ENST00000511382 CAPN15O75808 1086 aa10.34□□□□□ -0.75
PDE4D-219ENST00000511382 SPINK5Q9NQ38 1064 aaPredicted RBP10.34□□□□□ -0.75
PDE4D-219ENST00000511382 HMGXB3Q12766 1538 aa10.32□□□□□ -0.76
PDE4D-219ENST00000511382 TRHP20396 242 aaPredicted RBP10.29□□□□□ -0.76
PDE4D-219ENST00000511382 THOC2Q8NI27 1593 aaKnown RBP10.28□□□□□ -0.76
PDE4D-219ENST00000511382 ATAD2BQ9ULI0 1458 aa10.25□□□□□ -0.77
PDE4D-219ENST00000511382 SMARCA2P51531 1590 aa10.25□□□□□ -0.77
PDE4D-219ENST00000511382 PEG3Q9GZU2 1588 aa10.25□□□□□ -0.77
PDE4D-219ENST00000511382 SMARCA4P51532 1647 aa10.25□□□□□ -0.77
PDE4D-219ENST00000511382 ERCC6Q03468 1493 aa10.24□□□□□ -0.77
PDE4D-219ENST00000511382 ATXN8OSP0DMR3 200 aa10.24□□□□□ -0.77
PDE4D-219ENST00000511382 ZNF219Q9P2Y4 722 aaPredicted RBP10.24□□□□□ -0.77
PDE4D-219ENST00000511382 ATF5Q9Y2D1 282 aaPredicted RBP10.23□□□□□ -0.77
PDE4D-219ENST00000511382 LAMC3Q9Y6N6 1575 aa10.2□□□□□ -0.78
PDE4D-219ENST00000511382 NESP48681 1621 aa10.18□□□□□ -0.78
PDE4D-219ENST00000511382 KIF21AQ7Z4S6 1674 aa10.17□□□□□ -0.78
PDE4D-219ENST00000511382 BAZ1AQ9NRL2 1556 aaPredicted RBP10.14□□□□□ -0.79
PDE4D-219ENST00000511382 ABCB7O75027 752 aa10.14□□□□□ -0.79
PDE4D-219ENST00000511382 DSG3P32926 999 aa10.12□□□□□ -0.79
PDE4D-219ENST00000511382 BAZ1BQ9UIG0 1483 aaKnown RBP10.1□□□□□ -0.79
PDE4D-219ENST00000511382 POLA2Q14181 598 aa10.07□□□□□ -0.8
PDE4D-219ENST00000511382 WDR62O43379 1518 aa10.06□□□□□ -0.8
PDE4D-219ENST00000511382 PDS5BQ9NTI5 1447 aa10.03□□□□□ -0.8
PDE4D-219ENST00000511382 MROH2BQ7Z745 1585 aa10□□□□□ -0.81
PDE4D-219ENST00000511382 MRC2Q9UBG0 1479 aa9.98□□□□□ -0.81
PDE4D-219ENST00000511382 CADPSQ9ULU8 1353 aa9.95□□□□□ -0.82
PDE4D-219ENST00000511382 PRDM2Q13029 1718 aa9.93□□□□□ -0.82
PDE4D-219ENST00000511382 WIZO95785 1651 aa9.9□□□□□ -0.83
PDE4D-219ENST00000511382 CEP164Q9UPV0 1460 aa9.89□□□□□ -0.83
PDE4D-219ENST00000511382 ZBTB12Q9Y330 459 aaPredicted RBP9.88□□□□□ -0.83
PDE4D-219ENST00000511382 CFTRP13569 1480 aa9.86□□□□□ -0.83
PDE4D-219ENST00000511382 FBLN2P98095 1184 aa9.86□□□□□ -0.83
PDE4D-219ENST00000511382 TRIM41Q8WV44 630 aa9.85□□□□□ -0.83
PDE4D-219ENST00000511382 RIMBP3CA6NJZ7 1639 aa9.85□□□□□ -0.83
PDE4D-219ENST00000511382 RIMBP3BA6NNM3 1639 aa9.85□□□□□ -0.83
PDE4D-219ENST00000511382 RIMBP3Q9UFD9 1639 aa9.85□□□□□ -0.83
PDE4D-219ENST00000511382 FANCD2Q9BXW9 1451 aa9.84□□□□□ -0.83
PDE4D-219ENST00000511382 URB2Q14146 1524 aaKnown RBP9.82□□□□□ -0.84
PDE4D-219ENST00000511382 OSCARQ8IYS5 282 aa9.78□□□□□ -0.84
PDE4D-219ENST00000511382 TOP2AP11388 1531 aaKnown RBP9.77□□□□□ -0.85
PDE4D-219ENST00000511382 MKRN4PQ13434 485 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms