RNA–Protein interactions for RNA: ENST00000506510.6

PDE4D-215, Transcript of phosphodiesterase 4D, humanhuman

TSL 4

Gene PDE4D, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-215ENST00000506510 AEBP2Q6ZN18 517 aaPredicted RBP27.45■■□□□ 1.98
PDE4D-215ENST00000506510 CHIC1Q5VXU3 224 aa26.63■■□□□ 1.85
PDE4D-215ENST00000506510 PHF23Q9BUL5 403 aaPredicted RBP23.43■■□□□ 1.34
PDE4D-215ENST00000506510 SENP3Q9H4L4 574 aaPredicted RBP23.28■■□□□ 1.32
PDE4D-215ENST00000506510 FOXD1Q16676 465 aa21.65■■□□□ 1.06
PDE4D-215ENST00000506510 PLPPR3Q6T4P5 718 aa21.55■■□□□ 1.04
PDE4D-215ENST00000506510 PPP6R1Q9UPN7 881 aa20.72■□□□□ 0.91
PDE4D-215ENST00000506510 ADRA2BP18089 450 aa20.7■□□□□ 0.9
PDE4D-215ENST00000506510 PIAS4Q8N2W9 510 aaPredicted RBP20.4■□□□□ 0.86
PDE4D-215ENST00000506510 MSH5O43196 834 aa19.99■□□□□ 0.79
PDE4D-215ENST00000506510 PPP4R3CPQ6ZMV5 832 aa18.99■□□□□ 0.63
PDE4D-215ENST00000506510 SCAF1Q9H7N4 1312 aaKnown RBP18.87■□□□□ 0.61
PDE4D-215ENST00000506510 MAPK8IP2Q13387 824 aaPredicted RBP18.83■□□□□ 0.6
PDE4D-215ENST00000506510 DMRT2Q9Y5R5 561 aa18.57■□□□□ 0.56
PDE4D-215ENST00000506510 POTEDQ86YR6 584 aa18.5■□□□□ 0.55
PDE4D-215ENST00000506510 CNKSR2Q8WXI2 1034 aa18.47■□□□□ 0.55
PDE4D-215ENST00000506510 KCNA4P22459 653 aa18.41■□□□□ 0.54
PDE4D-215ENST00000506510 NCBP3Q53F19 620 aaKnown RBP18.41■□□□□ 0.54
PDE4D-215ENST00000506510 NPM3O75607 178 aaKnown RBP18.2■□□□□ 0.5
PDE4D-215ENST00000506510 RNF216Q9NWF9 866 aaPredicted RBP18.14■□□□□ 0.49
PDE4D-215ENST00000506510 HOXD11P31277 338 aaPredicted RBP18.1■□□□□ 0.49
PDE4D-215ENST00000506510 DCAF8L1A6NGE4 600 aa17.82■□□□□ 0.44
PDE4D-215ENST00000506510 DNAJC5BQ9UF47 199 aa17.59■□□□□ 0.41
PDE4D-215ENST00000506510 SLC4A1APQ9BWU0 796 aaKnown RBP17.49■□□□□ 0.39
PDE4D-215ENST00000506510 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.28■□□□□ 0.365e-6■■■■□ 19.5
PDE4D-215ENST00000506510 SLC4A2P04920 1241 aa17.21■□□□□ 0.35
PDE4D-215ENST00000506510 RNF39Q9H2S5 420 aa17.13■□□□□ 0.33
PDE4D-215ENST00000506510 U3KPZ7 1027 aaPredicted RBP17■□□□□ 0.31
PDE4D-215ENST00000506510 FOXD4L1Q9NU39 408 aa16.96■□□□□ 0.31
PDE4D-215ENST00000506510 ZBTB22O15209 634 aa16.95■□□□□ 0.3
PDE4D-215ENST00000506510 C1QBPQ07021 282 aaKnown RBP16.89■□□□□ 0.29
PDE4D-215ENST00000506510 EHMT2Q96KQ7 1210 aa16.87■□□□□ 0.29
PDE4D-215ENST00000506510 MYCNP04198 464 aaPredicted RBP16.8■□□□□ 0.28
PDE4D-215ENST00000506510 CACNB1Q02641 598 aaPredicted RBP16.8■□□□□ 0.28
PDE4D-215ENST00000506510 CSRNP3Q8WYN3 585 aa16.7■□□□□ 0.26
PDE4D-215ENST00000506510 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.67■□□□□ 0.26
PDE4D-215ENST00000506510 HNRNPUL2Q1KMD3 747 aaKnown RBP16.67■□□□□ 0.26
PDE4D-215ENST00000506510 SAMD1Q6SPF0 538 aaPredicted RBP16.63■□□□□ 0.25
PDE4D-215ENST00000506510 SPINK5Q9NQ38 1064 aaPredicted RBP16.59■□□□□ 0.25
PDE4D-215ENST00000506510 APLP2Q06481 763 aa16.53■□□□□ 0.24
PDE4D-215ENST00000506510 CAPN15O75808 1086 aa16.52■□□□□ 0.24
PDE4D-215ENST00000506510 TRHP20396 242 aaPredicted RBP16.41■□□□□ 0.22
PDE4D-215ENST00000506510 ATF5Q9Y2D1 282 aaPredicted RBP16.4■□□□□ 0.22
PDE4D-215ENST00000506510 ZNF219Q9P2Y4 722 aaPredicted RBP16.36■□□□□ 0.21
PDE4D-215ENST00000506510 ATXN8OSP0DMR3 200 aa16.33■□□□□ 0.2
PDE4D-215ENST00000506510 DSG3P32926 999 aa16.26■□□□□ 0.19
PDE4D-215ENST00000506510 ABCB7O75027 752 aa16.23■□□□□ 0.19
PDE4D-215ENST00000506510 POLA2Q14181 598 aa16.09■□□□□ 0.17
PDE4D-215ENST00000506510 ZBTB12Q9Y330 459 aaPredicted RBP15.78■□□□□ 0.12
PDE4D-215ENST00000506510 FBLN2P98095 1184 aa15.67■□□□□ 0.1
PDE4D-215ENST00000506510 MKRN4PQ13434 485 aaPredicted RBP15.67■□□□□ 0.1
PDE4D-215ENST00000506510 OSCARQ8IYS5 282 aa15.58■□□□□ 0.08
PDE4D-215ENST00000506510 RBM42Q9BTD8 480 aaKnown RBP15.47■□□□□ 0.07
PDE4D-215ENST00000506510 SPDYE2BA6NHP3 402 aa15.35■□□□□ 0.05
PDE4D-215ENST00000506510 SPDYE6P0CI01 402 aa15.35■□□□□ 0.05
PDE4D-215ENST00000506510 SPDYE2Q495Y8 402 aa15.35■□□□□ 0.05
PDE4D-215ENST00000506510 ZNF692Q9BU19 519 aaPredicted RBP15.28■□□□□ 0.04
PDE4D-215ENST00000506510 AKT1S1Q96B36 256 aa15.25■□□□□ 0.03
PDE4D-215ENST00000506510 SPDYE4A6NLX3 237 aa15.23■□□□□ 0.03
PDE4D-215ENST00000506510 SSUH2Q9Y2M2 353 aa15.23■□□□□ 0.03
PDE4D-215ENST00000506510 FKBP8Q14318 412 aa15.13■□□□□ 0.01
PDE4D-215ENST00000506510 REM2Q8IYK8 340 aaPredicted RBP15.12■□□□□ 0.01
PDE4D-215ENST00000506510 PABPN1Q86U42 306 aaKnown RBP eCLIP15.09■□□□□ 0.01
PDE4D-215ENST00000506510 PITPNM1O00562 1244 aa14.98□□□□□ -0.01
PDE4D-215ENST00000506510 SPDYE1Q8NFV5 336 aaPredicted RBP14.94□□□□□ -0.02
PDE4D-215ENST00000506510 PROM2Q8N271 834 aa14.93□□□□□ -0.02
PDE4D-215ENST00000506510 CLEC11AQ9Y240 323 aa14.93□□□□□ -0.02
PDE4D-215ENST00000506510 CHRDL2Q6WN34 429 aa14.91□□□□□ -0.02
PDE4D-215ENST00000506510 STAG3Q9UJ98 1225 aa14.76□□□□□ -0.05
PDE4D-215ENST00000506510 PRR29P0C7W0 189 aa14.73□□□□□ -0.05
PDE4D-215ENST00000506510 PIP4P2Q8N4L2 257 aa14.7□□□□□ -0.06
PDE4D-215ENST00000506510 FXR2P51116 673 aaKnown RBP eCLIP14.69□□□□□ -0.06
PDE4D-215ENST00000506510 POTEHQ6S545 545 aa14.62□□□□□ -0.07
PDE4D-215ENST00000506510 PRKAR2AP13861 404 aaKnown RBP14.6□□□□□ -0.07
PDE4D-215ENST00000506510 CHADLQ6NUI6 762 aa14.59□□□□□ -0.07
PDE4D-215ENST00000506510 FBXO3Q9UK99 471 aa14.58□□□□□ -0.08
PDE4D-215ENST00000506510 CREBZFQ9NS37 354 aa14.52□□□□□ -0.09
PDE4D-215ENST00000506510 MIER1Q8N108 512 aa14.45□□□□□ -0.1
PDE4D-215ENST00000506510 PLCD3Q8N3E9 789 aa14.43□□□□□ -0.1
PDE4D-215ENST00000506510 VASPP50552 380 aaPredicted RBP14.42□□□□□ -0.1
PDE4D-215ENST00000506510 FARP1Q9Y4F1 1045 aaPredicted RBP14.39□□□□□ -0.11
PDE4D-215ENST00000506510 PLEKHG5O94827 1062 aa14.37□□□□□ -0.11
PDE4D-215ENST00000506510 MNX1P50219 401 aaPredicted RBP14.35□□□□□ -0.11
PDE4D-215ENST00000506510 HAX1O00165 279 aa14.26□□□□□ -0.13
PDE4D-215ENST00000506510 NPM1P06748 294 aaKnown RBP eCLIP14.25□□□□□ -0.13
PDE4D-215ENST00000506510 ZBTB47Q9UFB7 747 aaPredicted RBP14.24□□□□□ -0.13
PDE4D-215ENST00000506510 IFNLR1Q8IU57 520 aaPredicted RBP14.22□□□□□ -0.13
PDE4D-215ENST00000506510 KLHL34Q8N239 644 aa14.21□□□□□ -0.13
PDE4D-215ENST00000506510 C19orf67A6NJJ6 358 aa14.19□□□□□ -0.14
PDE4D-215ENST00000506510 CD44P16070 742 aaKnown RBP14.17□□□□□ -0.14
PDE4D-215ENST00000506510 EVX2Q03828 476 aa14.15□□□□□ -0.14
PDE4D-215ENST00000506510 NUBP1P53384 320 aa14.1□□□□□ -0.15
PDE4D-215ENST00000506510 RASEFQ8IZ41 740 aa14.1□□□□□ -0.15
PDE4D-215ENST00000506510 PAK3O75914 559 aaPredicted RBP14.07□□□□□ -0.16
PDE4D-215ENST00000506510 TSPYL2Q9H2G4 693 aaPredicted RBP14.07□□□□□ -0.16
PDE4D-215ENST00000506510 ZRANB1Q9UGI0 708 aa14.07□□□□□ -0.16
PDE4D-215ENST00000506510 SPOCK2Q92563 424 aa14.05□□□□□ -0.16
PDE4D-215ENST00000506510 SP7Q8TDD2 431 aaPredicted RBP13.99□□□□□ -0.17
PDE4D-215ENST00000506510 FAM212AQ96EL1 285 aa13.99□□□□□ -0.17
PDE4D-215ENST00000506510 ZNF579Q8NAF0 562 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms