Protein–RNA interactions for Protein: A1A4V9

CCDC189, Coiled-coil domain-containing protein 189, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189A1A4V9 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC22.88■■□□□ 1.25
CCDC189A1A4V9 SSSCA1-AS1-201ENST00000567594 614 ntBASIC22.88■■□□□ 1.25
CCDC189A1A4V9 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC189A1A4V9 HLA-L-211ENST00000482052 1765 ntBASIC22.88■■□□□ 1.25
CCDC189A1A4V9 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC22.87■■□□□ 1.25
CCDC189A1A4V9 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC189A1A4V9 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC189A1A4V9 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC189A1A4V9 AL592293.1-201ENST00000502889 1188 ntBASIC22.87■■□□□ 1.25
CCDC189A1A4V9 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC22.87■■□□□ 1.25
CCDC189A1A4V9 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC189A1A4V9 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC189A1A4V9 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.87■■□□□ 1.25
CCDC189A1A4V9 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC22.87■■□□□ 1.25
CCDC189A1A4V9 GNPTG-201ENST00000204679 1983 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC189A1A4V9 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.86■■□□□ 1.25
CCDC189A1A4V9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC22.86■■□□□ 1.25
CCDC189A1A4V9 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC189A1A4V9 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC189A1A4V9 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC22.86■■□□□ 1.25
CCDC189A1A4V9 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC189A1A4V9 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC189A1A4V9 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC189A1A4V9 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC22.86■■□□□ 1.25
CCDC189A1A4V9 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC22.86■■□□□ 1.25
CCDC189A1A4V9 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC189A1A4V9 RARRES2P2-201ENST00000394842 485 ntBASIC22.85■■□□□ 1.25
CCDC189A1A4V9 AL592295.1-201ENST00000400984 884 ntBASIC22.85■■□□□ 1.25
CCDC189A1A4V9 MIR6765-201ENST00000614092 87 ntBASIC22.85■■□□□ 1.25
CCDC189A1A4V9 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC189A1A4V9 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC189A1A4V9 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.85■■□□□ 1.25
CCDC189A1A4V9 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC22.85■■□□□ 1.25
CCDC189A1A4V9 AC004812.2-201ENST00000611079 2094 ntBASIC22.85■■□□□ 1.25
CCDC189A1A4V9 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC22.85■■□□□ 1.25
CCDC189A1A4V9 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.84■■□□□ 1.25
CCDC189A1A4V9 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CCDC189A1A4V9 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC189A1A4V9 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC22.84■■□□□ 1.25
CCDC189A1A4V9 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC22.84■■□□□ 1.25
CCDC189A1A4V9 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC22.84■■□□□ 1.25
CCDC189A1A4V9 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CCDC189A1A4V9 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
CCDC189A1A4V9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC22.84■■□□□ 1.25
CCDC189A1A4V9 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC22.84■■□□□ 1.25
CCDC189A1A4V9 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC189A1A4V9 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC189A1A4V9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC189A1A4V9 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC189A1A4V9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
CCDC189A1A4V9 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC189A1A4V9 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC22.83■■□□□ 1.25
CCDC189A1A4V9 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC22.83■■□□□ 1.25
CCDC189A1A4V9 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC22.83■■□□□ 1.24
CCDC189A1A4V9 AL161729.1-201ENST00000604104 1402 ntBASIC22.82■■□□□ 1.24
CCDC189A1A4V9 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
CCDC189A1A4V9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC189A1A4V9 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CCDC189A1A4V9 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC189A1A4V9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC22.82■■□□□ 1.24
CCDC189A1A4V9 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC189A1A4V9 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC189A1A4V9 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.82■■□□□ 1.24
CCDC189A1A4V9 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC189A1A4V9 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC189A1A4V9 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC189A1A4V9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC22.81■■□□□ 1.24
CCDC189A1A4V9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC189A1A4V9 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC189A1A4V9 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC189A1A4V9 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC22.81■■□□□ 1.24
CCDC189A1A4V9 SPCS2P3-201ENST00000500401 656 ntBASIC22.81■■□□□ 1.24
CCDC189A1A4V9 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
CCDC189A1A4V9 OXLD1-203ENST00000571503 803 ntTSL 2 BASIC22.81■■□□□ 1.24
CCDC189A1A4V9 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC189A1A4V9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC189A1A4V9 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC22.8■■□□□ 1.24
CCDC189A1A4V9 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC189A1A4V9 AC090877.2-201ENST00000558441 1738 ntBASIC22.8■■□□□ 1.24
CCDC189A1A4V9 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC189A1A4V9 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC189A1A4V9 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC189A1A4V9 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
CCDC189A1A4V9 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC189A1A4V9 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC22.8■■□□□ 1.24
CCDC189A1A4V9 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.79■■□□□ 1.24
CCDC189A1A4V9 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC22.79■■□□□ 1.24
CCDC189A1A4V9 FKBP1A-211ENST00000618612 1518 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC189A1A4V9 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC189A1A4V9 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC189A1A4V9 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC189A1A4V9 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC189A1A4V9 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC189A1A4V9 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC22.79■■□□□ 1.24
CCDC189A1A4V9 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC189A1A4V9 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC189A1A4V9 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC189A1A4V9 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC189A1A4V9 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC22.78■■□□□ 1.24
CCDC189A1A4V9 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms