Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 AL138799.1-201ENST00000448213 1675 ntBASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
PCDHGA11Q9Y5H2 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 AL360270.3-201ENST00000609118 1348 ntBASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 MIR770-201ENST00000390219 98 ntBASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 NUS1P3-201ENST00000423502 862 ntBASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 SLC9A7P1-202ENST00000556476 2239 ntBASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
PCDHGA11Q9Y5H2 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 AC117489.1-201ENST00000625169 3217 ntBASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 AC093525.8-201ENST00000624099 1342 ntBASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 MARS-201ENST00000262027 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 AL353779.1-201ENST00000434793 351 ntBASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 GNAQP1-201ENST00000444815 1067 ntBASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 VDAC1P7-201ENST00000462417 847 ntBASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 CDK2AP2-205ENST00000531506 634 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 BRI3BPP1-201ENST00000594224 787 ntBASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 AL662799.1-202ENST00000614205 422 ntBASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 AJ011932.1-201ENST00000621707 465 ntBASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 SLC7A15P-201ENST00000424028 1363 ntBASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 LILRP1-201ENST00000444199 1370 ntBASIC14.72□□□□□ -0.05
PCDHGA11Q9Y5H2 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC14.72□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms