Protein–RNA interactions for Protein: Q99500

S1PR3, Sphingosine 1-phosphate receptor 3, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
S1PR3Q99500 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
S1PR3Q99500 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.56□□□□□ -0.4
S1PR3Q99500 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC12.56□□□□□ -0.4
S1PR3Q99500 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
S1PR3Q99500 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.56□□□□□ -0.4
S1PR3Q99500 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.55□□□□□ -0.4
S1PR3Q99500 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC12.55□□□□□ -0.4
S1PR3Q99500 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
S1PR3Q99500 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 UACA-201ENST00000322954 6939 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
S1PR3Q99500 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC12.55□□□□□ -0.4
S1PR3Q99500 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.55□□□□□ -0.4
S1PR3Q99500 MUC20-201ENST00000320736 1916 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
S1PR3Q99500 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
S1PR3Q99500 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.55□□□□□ -0.4
S1PR3Q99500 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.55□□□□□ -0.4
S1PR3Q99500 AC104457.1-201ENST00000401024 814 ntBASIC12.55□□□□□ -0.4
S1PR3Q99500 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.55□□□□□ -0.4
S1PR3Q99500 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.55□□□□□ -0.4
S1PR3Q99500 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC12.55□□□□□ -0.4
S1PR3Q99500 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC12.55□□□□□ -0.4
S1PR3Q99500 REEP4-207ENST00000523293 913 ntTSL 3 BASIC12.55□□□□□ -0.4
S1PR3Q99500 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.55□□□□□ -0.4
S1PR3Q99500 SPCS2P1-201ENST00000561636 679 ntBASIC12.55□□□□□ -0.4
S1PR3Q99500 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC12.55□□□□□ -0.4
S1PR3Q99500 AC036164.1-201ENST00000570544 333 ntBASIC12.55□□□□□ -0.4
S1PR3Q99500 SAMD11P1-201ENST00000571429 661 ntBASIC12.55□□□□□ -0.4
S1PR3Q99500 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.55□□□□□ -0.4
S1PR3Q99500 AL096865.1-201ENST00000606796 927 ntBASIC12.55□□□□□ -0.4
S1PR3Q99500 AC004840.1-201ENST00000636359 365 ntBASIC12.55□□□□□ -0.4
S1PR3Q99500 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
S1PR3Q99500 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 MED14-201ENST00000324817 7984 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
S1PR3Q99500 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
S1PR3Q99500 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC12.55□□□□□ -0.4
S1PR3Q99500 LINC00552-201ENST00000625151 2579 ntBASIC12.55□□□□□ -0.4
S1PR3Q99500 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.55□□□□□ -0.4
S1PR3Q99500 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
S1PR3Q99500 PDE7A-203ENST00000401827 3673 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC12.55□□□□□ -0.4
S1PR3Q99500 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC12.54□□□□□ -0.4
S1PR3Q99500 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
S1PR3Q99500 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.54□□□□□ -0.4
S1PR3Q99500 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.54□□□□□ -0.4
S1PR3Q99500 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC12.54□□□□□ -0.4
S1PR3Q99500 ZBTB11-201ENST00000312938 6020 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 YTHDC1-202ENST00000355665 3244 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC12.54□□□□□ -0.4
S1PR3Q99500 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC12.54□□□□□ -0.4
S1PR3Q99500 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC12.54□□□□□ -0.4
S1PR3Q99500 BCRP1-201ENST00000444246 691 ntBASIC12.54□□□□□ -0.4
S1PR3Q99500 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC12.54□□□□□ -0.4
S1PR3Q99500 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC12.54□□□□□ -0.4
S1PR3Q99500 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC12.54□□□□□ -0.4
S1PR3Q99500 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC12.54□□□□□ -0.4
S1PR3Q99500 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.54□□□□□ -0.4
S1PR3Q99500 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
S1PR3Q99500 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.54□□□□□ -0.4
S1PR3Q99500 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.54□□□□□ -0.4
S1PR3Q99500 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 REXO1L4P-201ENST00000605109 1937 ntBASIC12.54□□□□□ -0.4
S1PR3Q99500 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
S1PR3Q99500 LINC01107-201ENST00000446979 1975 ntTSL 2 BASIC12.54□□□□□ -0.4
S1PR3Q99500 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms